Search bioRxiv⌕ Search

bioRxiv · 10.1101/2025.08.11.669600

Impacts of disease surveillance frequency on understanding and controlling Rift Valley fever virus

Abstract

Effective livestock disease surveillance faces numerous socio-economic and disease-specific challenges, particularly within resource-limited settings. Rift Valley fever (RVF), a zoonotic vector-borne disease which is of growing threat to human and veterinary health, exemplifies these challenges, consequently leading to irregular or infrequent surveillance. While mathematical models frequently utilise these surveillance data to understand disease dynamics and assess the effectiveness of disease control measures, the impact of surveillance frequency on these model-based assessments is not clear. To address this, we used a livestock RVF virus infection model, which incorporates spatial and age structures, livestock movement, and environmental factors. We then generated synthetic cross-sectional seroprevalence surveys with varying frequencies from outbreak scenarios inferred from empirical serological data from the Comoros archipelago. By refitting the model to these synthetic data, we found that lower surveillance frequency was associated with increased uncertainties in understanding disease biology, inferring past outbreak timing, predicting future outbreak size, and recommending optimal control measures. In particular, once serological surveillance was less frequent than annually, the ability to distinguish spatio-temporal patterns of disease transmission and forecast trends diminished. These findings emphasise the need for adequately frequent surveillance data to ensure robust model-based analyses which inform effective preparedness and control strategies for livestock diseases within resource-limited settings. Author summaryDisease surveillance underpins mathematical models that are used to understand the emergence, spread and persistence of disease, and assess and compare the impacts of disease control measures. However, regular surveillance is a particular challenge for livestock diseases in resource-limited settings, such as those affected by Rift Valley fever. Here, our work provides an illustrative example of how surveillance frequency impacts our ability to understand disease outbreaks and to decide which control measures are most effective at combatting disease, using outbreak scenarios for Rift Valley fever in the Comoros archipelago. By simulating from a mathematical model informed by different surveillance frequencies, we found that less frequent surveillance was associated with greater uncertainty in model predictions, and demonstrated that this may distort epidemiological understanding and future control recommendations of a disease. Our work has crucial implications for animal health decision-making, highlighting the importance of consistent and frequent surveillance to improve disease management and prioritise disease control measures.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Tennant, W. S. D., Carson, J., Guyver-Fletcher, G., Metras, R., Tildesley, M. J.. 2025-08-12. Impacts of disease surveillance frequency on understanding and controlling Rift Valley fever virus. https://doi.org/10.1101/2025.08.11.669600

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

A leaf-carbon economy model to explain the adaptive value of low vs. high leaf mass per area as a function of habitat productivity

Plant traits interact with environmental conditions to determine plant fitness. In particular, plant species with low leaf mass per area (LMA) are more common in high fertility soils and forest gaps, while plant species with high LMA are more common in low fertility soils and in shaded forest understories. It is not yet known why the adaptive value of LMA changes as a function of environmental productivity. We present a model for plant growth as a function of LMA and productivity. Our model relies on an empirically derived relationship between LMA and leaf lifespan. We are able to explain why species with lower LMA are successful in high productivity environments including environments with high availability of either light or soil nutrients, by showing that the LMA which maximizes growth rate decreases with increasing rate of carbon assimilation. We show that low LMA species are better at taking advantage of the 'high interest' environment of high productivity habitats by reinvesting assimilated carbon in new leaves and earning compound interest, while high LMA species grow more efficiently in the 'low interest' environment of low productivity habitats. This tradeoff sheds light on the adaptive value of LMA as it relates to environmental productivity.

ecology↗

Species differentiate water uptake depths within a narrow vertical zone in temperate grasslands

Whether and under which conditions coexisting species in temperate grasslands differentiate their water uptake within the shallow soil layer they share is central to understanding hydrological niche differentiation in these ecosystems. In this field study, we quantified water uptake depth of 28 coexisting herbaceous species across 74 temperate grassland plots in three regions of Germany using oxygen stable isotopes and soil water content measured at multiple depths. Species consistently differed in water uptake depth across all regions, consistent with hydrological niche differentiation. This differentiation was largely confined to the upper 30 cm of soil and became stronger as overall soil moisture declined, with plants accessing water at greater depths in drier plots. In contrast, the vertical distribution of soil moisture was unrelated to either uptake depth or species differentiation. Despite pronounced species level variation, broad herbaceous functional classifications, including grasses versus forbs and fibrous versus taprooted species, showed substantial overlap in water uptake depth. Together, our results show that hydrological niche differentiation in temperate grasslands is expressed through fine scale differences among species within a shared shallow soil domain, becomes more pronounced under drier conditions, and is poorly captured by broad herbaceous functional classifications.

ecology↗

Fungal-bacterial interactions enhance bacterial but constrain fungal resistance and recovery to extreme heat across soil moisture levels

Soil fungi and bacteria are key drivers of nutrient cycling and plant productivity in terrestrial ecosystems, yet their responses to climate extremes are rarely studied as interacting partners rather than in isolation. Moreover, it remains largely unknown how fungal-bacterial interactions regulate fungal and bacterial stability under climate extremes, particularly resistance (immediate responses to climate extremes) and recovery (responses after climate extremes cease). Here, we conducted a soil microcosm experiment with a bacterial species (Pseudomonas putida KT2440) paired with one of four Trichoderma species (T. hamatum, T. atroviride, T. koningiopsis, and T. harzianum). These fungal-bacterial pairs were then exposed to a 5-day heat event (40 {degrees}C/32 {degrees}C, day/night) followed by a 14-day recovery period (25 {degrees}C/17 {degrees}C, day/night), at two soil moisture levels (30% and 5% gravimetric water content). Our results show that fungal-bacterial interactions asymmetrically affect fungal and bacterial responses to extreme heat. Trichoderma species facilitated the resistance and recovery of P. putida density (CFUs) to extreme heat, whereas P. putida constrained the resistance and recovery of fungal biomass (ergosterol) to extreme heat, regardless of soil moisture conditions. Moreover, faster-growing Trichoderma species were associated with greater facilitation of bacterial resistance and recovery. Bacterial density also covaried positively with fungal biomass during heat stress under both soil moisture conditions, suggesting that net fungal facilitation enhances bacterial persistence under extreme heat. Together, our findings reveal that fungal-bacterial interactions can stabilize one microbial partner while increasing the vulnerability of the other, highlighting the contrasting consequences of biotic interactions under climate extremes.

ecology↗