SER: an R package to compute environmental regime over a certain time period

Wu, N.; Guo, K.; Zou, Y.; He, F.; Riis, T.

doi:10.1101/2022.03.19.485011

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bioRxiv · 10.1101/2022.03.19.485011

SER: an R package to compute environmental regime over a certain time period

Wu, N.·Guo, K.·Zou, Y.·He, F.·Riis, T.

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Abstract

O_LIEnvironmental regime (or environmental legacy or historical legacy) is the environmental dynamic characteristics over a given (either long or short) time period, such as frequency of mean or extreme events and rate of change, which might be masked by using only contemporary variables. C_LIO_LIWe present SER, an R package for estimating environmental regimes for different environmental variables. Using the data included in the package, several examples are shown. C_LIO_LISER is suitable for any types of environmental variables e.g., nutrient concentration, light, dissolved oxygen. In addition, by changing the argument "days_bf", it is possible to compute environmental regimes in any interested time period, such as days, months or years. C_LIO_LIOur case study showed that inclusion of environmental regimes dramatically increased the explained variation of temporal {beta}-diversity and its components. Environmental regimes, particularly in a given time period, are expected to advance the "environment - community" relationships in ecological studies. In addition, they can be implemented in other subjects, e.g., social science, socioeconomics, epidemiology, with important applied implications. C_LI

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Wu, N., Guo, K., Zou, Y., He, F., Riis, T.. 2022-03-21. SER: an R package to compute environmental regime over a certain time period. https://doi.org/10.1101/2022.03.19.485011

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