Search bioRxivSearch

Biology subjects

Shimony, J. S.

Publications and source records attributed to Shimony, J. S..

3 recordsLinked to original sources

Precision Diffusion Imaging

Diffusion tensor imaging (DTI) aims to non-invasively characterize the anatomy and integrity of the brains white matter fibers. To establish individual-specific precision approaches for DTI, we defined its reliability and accuracy as a function of data quantity and analysis method, using both simulations and highly sampled individual-specific data (927-1442 diffusion weighted images [DWIs] per individual). DTI methods that allow for crossing fibers (BedpostX [BPX], Q-Ball Imaging [QBI]) estimated excess fibers when insufficient data was present and when the data did not match the model priors. To reduce such overfitting, we developed a novel crossing-fiber diffusion imaging method, Bayesian Multi-tensor Model-selection (BaMM), that is designed for high-quality repeated sampling data sets. BaMM was robust to overfitting, showing high reliability and the relatively best crossing-fiber accuracy with increasing amounts of diffusion data. Thus, the choice of diffusion imaging analysis method is important for the success of individual-specific diffusion imaging. Importantly, for potential clinical applications of individual-specific precision DTI, such as deep brain stimulation (DBS), other forms of neuromodulation or neurosurgical planning, the data quantities required to achieve DTI reliability are lower than for functional MRI measures.

neuroscience

Parallel Hippocampal-Parietal Circuits for Self- and Goal-oriented Processing

The hippocampus is critically important for a diverse range of cognitive processes, such as episodic memory, prospective memory, affective processing, and spatial navigation. The human hippocampus has been thought of as being solely functionally connected to a set of neocortical regions known as the default mode network (DMN), which supports self-referential cognition. Using individual-specific precision functional mapping of resting state fMRI data, we found the anterior hippocampus (head and body) to be preferentially connected to the DMN as expected. The hippocampal tail, however, was strongly preferentially connected to the parietal memory network (PMN), which supports goal-oriented cognition and stimulus recognition. This resting state functional connectivity (RSFC) anterior-posterior dichotomy was well-matched by differences in task deactivations and anatomical segmentations of the hippocampus. Task deactivations were localized to the head and body of the hippocampus (DMN), relatively sparing the tail (PMN). Anterior and posterior hippocampal connectivity was network-specific even though the DMN and PMN are interdigitated in medial parietal cortex. The functional dichotomization of the hippocampus into anterior DMN-connected and posterior PMN-connected parcels suggests parallel, but distinct circuits between the hippocampus and medial parietal cortex for self vs. goal-oriented processing.

neuroscience

Cognitive Deficits and Altered Functional Brain Network Organization in Pediatric Brain Tumor Patients

Pediatric brain tumor survivors experience significant cognitive sequelae from their diagnosis and treatment. The exact mechanisms of cognitive injury are poorly understood, and validated predictors of long-term cognitive outcome are lacking. Large-scale, distributed brain systems provide a window into brain organization and function that may yield insight into these mechanisms and outcomes. Here, we evaluated functional network architecture, cognitive performance, and brain-behavior relationships in pediatric brain tumor patients. Patients ages 4-18 years old with diagnosis of a brain tumor underwent awake resting state fMRI during regularly scheduled clinical visits and were tested with the NIH Toolbox Cognition Battery. We observed that functional network organization was significantly altered in patients compared to age- and sex-matched healthy controls, with the integrity of the dorsal attention network particularly affected. Moreover, patients demonstrated significant impairments in multiple domains of cognitive performance, including attention. Finally, a significant amount of variance of age-adjusted total composite scores from the Toolbox was explained by changes in segregation between the dorsal attention and default mode networks. Our results suggest that changes in functional network organization may provide insight into long-term changes in cognitive function in pediatric brain tumor patients.

neuroscience