Biology subjects

Ortega-Solis, G.

Publications and source records attributed to Ortega-Solis, G..

3 recordsLinked to original sources

bioRxiv2026

Probabilistic species distributions from nine large-scale gridded atlases over five decades

Information on the long-term dynamics of species distributions is essential for assessing global biodiversity change and its causes, and for informed conservation decisions. A valuable source of such historical information are atlases. They provide spatial standardisation, extensive geographic coverage, temporal replication, documented sampling protocols, and span multiple species. Here we present model-based occupancy probabilities for 1,055 bird and 58 butterfly species, derived from nine gridded atlas datasets spanning several editions over the past 50 years. These are: Japan, New Zealand, New York state (US), the states of Alberta, Quebec, and The Maritimes (Canada), Czech Republic, United Kingdom, and Europe. Despite standardisation and coordination during data collection, the raw atlas data still contain some variation in sampling effort. We accounted for this using a two-step process: (1) we estimated a proxy for sampling effort in each grid cell within each atlas period using the Frescalo Algorithm, and (2) we ran a Bayesian spatial occupancy model for each species and atlas period, using the estimated sampling effort as the single predictor of detection in the observation process of the model. As the main product, we provide occupancy probabilities for species across grid cells and atlas periods. We also report uncertainty around each probability estimate and flag ~21% (rare) species per atlas for which the model did not fit well. The probability distributions are fit for purpose and served in a user-friendly database with standardised geographic projection, metadata, and taxonomy.

ecology↗

bioRxiv2026

Temporal span of biodiversity monitoring mediates the effects of area and environment

The scale at which diversity is observed shapes the patterns we find. While spatial scale is known to influence biodiversity patterns, the effects of temporal scale, namely the average duration of sampling (known as temporal span), have been mostly overlooked. Here, we investigate how temporal span affects species richness patterns, their environmental drivers, and species richness hotspots. We used species richness data from several large bird datasets from Czechia, with over 7000 observations, a spatial grain ranging from 0.03 to 100 km2, and a temporal span ranging from 1 to 36 years (1985-2017). Using Random Forests, we modelled species richness as a response to temporal span, while also including area, geographic location, time, and environmental and land-cover predictors. We found that the temporal span is consistently among the most important predictors of bird species richness. Moreover, temporal span interacts with key environmental conditions, particularly precipitation and water bodies, modulating their effects on species richness and revealing processes that differ from those traditionally attributed solely to spatial grain. We also found that using different time spans can shift the predicted locations of biodiversity hotspots. Our results provide empirical evidence that temporal span should be included in studies about biodiversity and conservation planning, given the urgent challenges arising from ongoing biodiversity change and the complexity of its drivers.

ecology↗

bioRxiv2021

Trash-basket epiphytes as secondary foundation species: a review of their distribution and effects on biodiversity and ecosystem functions

BackgroundSecondary foundation species (FS) are organisms that inhabit ecosystems structurally defined by a primary foundation species, providing additional structure to habitats and communities. Trash-basket epiphytes (TBE) are secondary FS that enhance arboreal soil accumulation, providing shelter to animals, and rooting sites for plants. While their importance may vary across biomes, TBE have been overlooked as drivers of biodiversity and ecosystem functions. Here, we discuss the prevalence of TBE across biomes, their effects on biodiversity and ecosystem functions, and future research directions. MethodsWe performed a systematic literature review of articles, books and theses and collated and synthesised information about the taxonomic distribution of TBE, their effects on ecosystem functions, and reports of plant-animal and plant-plant interactions. Then, we analysed the global distribution of TBE using a generalized linear model and summarised two studies to assess their effects on soil invertebrates. ResultsWe identified 120 publications describing 209 species of TBE. Most TBE belong to Araceae (43%), Polypodiaceae (23%), and Orchidaceae (14%) and occur in all tropical and southern temperate forests. TBE richness peaks in the South-American Pacific mangroves, Eastern Cordillera Real, and the Napo moist forests. TBE effects on ecosystem functions include arboreal soil accumulation, water retention and temperature regulation in the canopy, and nutrient leaching through stem-flow. TBE provide shelter to species in more than 97 animal families, including from invertebrates to mammals, while 72 vascular plants have been reported to root in arboreal soil of TBE. ConclusionsTBE are a compelling group of model organisms that can be used to study ecological processes such as facilitation cascades, niche construction, extended phenotypes, or the effects of secondary FS on biodiversity and ecosystem functioning. TBE should also be included in forest management plans to enhance the availability of microhabitats in the canopy supporting its associated flora and fauna.

ecology↗