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Biology subjects

Müller, R.

Publications and source records attributed to Müller, R..

At least 19 recordsLinked to original sources
bioRxiv2026

Neuropeptide Y4 receptor activation delays autoimmune diabetes by reprogramming β-cell stress and immune tolerance

Type 1 diabetes (T1D) involves immune-mediated destruction of pancreatic {beta}-cells, yet current disease-modifying therapies mainly target immunity without enhancing {beta}-cell resilience. We show selective neuropeptide Y4 receptor (Y4R) agonism protects {beta}-cells while reshaping islet immunity across T1D models. Multi-modal localisation using cell sorting, qPCR, RNAscope and fluorescent ligand competition demonstrated predominant Y4R expression and functional accessibility on mouse and human {beta}-cells. Selective Y4R agonism was non-toxic and did not impair islet network integrity, Ca{superscript 2} dynamics, glucose-stimulated insulin secretion or systemic glucose tolerance. Y4R activation conferred cytoprotection against inflammatory cytokines, streptozotocin, lipotoxicity and ER stress, reducing caspase-3/7 activation and {beta}-cell loss whilst sustaining insulin release and promoting proliferation in both mouse and human islets. Bulk RNA-seq revealed a coordinated {beta}-cell resilience programme characterised by reinforced identity and insulin processing, KEAP1-NFE2L2-driven antioxidative and proteostatic activation, and suppression of EIF2 signalling and associated biosynthetic and ER stress pathways. Concurrently, Y4R agonism dampened pathogenic chemokine and cytokine networks, including CXCL10, CCL3/4/7 and IL-6, while preserving IL-2 and Foxp3 signals, thereby limiting CD8 T cell, CD4 T cell and macrophage chemotaxis toward cytokine-stressed islets. Reduced immune-cell recruitment was conserved in a fully human immune-islet system, where Y4R activation significantly attenuated IL-2-activated human PBMC migration and invasion toward cytokine-stressed human islets. In a stringent NY8.3 CD8 T cell adoptive-transfer model, systemic Y4R agonism significantly delayed diabetes onset. These data position Y4R as a {beta}-cell-centric therapeutic target coupling intrinsic resilience with local immune modulation, offering a complementary approach for {beta}-cell preservation in T1D and islet replacement therapies. Graphical abstractThe selective Y4 receptor agonist K22 binds {beta}-cell-enriched NPY4R in mouse and human islets, activates a {beta}-cell resilience programme that preserves insulin secretion under inflammatory and metabolic stress, and simultaneously dampens islet chemokine output, thereby limiting innate and adaptive immune-cell recruitment and delaying autoimmune diabetes onset. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=119 SRC="FIGDIR/small/736290v1_ufig1.gif" ALT="Figure 1"> View larger version (34K): org.highwire.dtl.DTLVardef@7efd48org.highwire.dtl.DTLVardef@1268860org.highwire.dtl.DTLVardef@c38a81org.highwire.dtl.DTLVardef@1ba3e6c_HPS_FORMAT_FIGEXP M_FIG C_FIG

cell biology↗
bioRxiv2026

Thermal responses of an emerging temperate mosquito reshape arboviral transmission risk

Global warming is known to increase arboviral disease risk by enabling the expansion of tropical vectors such as Aedes aegypti and Aedes albopictus. However, whether climate-driven shifts in seasonal dynamics within temperate regions, such as warmer springs and shorter winters, create thermal settings favourable for additional vectors, which can reshape disease risk maps, is poorly understood. To answer this question, we used the invasive temperate mosquito species Aedes koreicus and tested its thermal developmental resilience, along with its vector competence for dengue and chikungunya viruses. We observed significant phenotypic variation in thermal tolerance across life stages, which translates into distinct thermal performance curves for life-history traits, ultimately shaping overall mosquito fitness. We further found that temperature effects are virus-specific, with differential impacts on infection and transmission between dengue and chikungunya viruses. These stage- and pathogen-specific responses generate carry-over effects across life stages, indicating that thermal responses may be constrained by life-history trade-offs rather than be defined by a single thermal optimum. Our results highlight the need to move beyond static, species-based risk assessments toward mechanistic frameworks that integrate thermal biology across life stages and vector-pathogen systems. As climate change increasingly reshapes seasonal structure rather than simply elevating mean temperatures, cold-adapted and temperate vectors such as Ae. koreicus, provide critical model systems to understand how transmission risk emerges outside mosquito classical thermal optima, calling for a broader paradigm shift in how global change and vector-borne disease risk are conceptualised.

ecology↗
bioRxiv2026

Decoding antibiotic modes of action from multimodal cellular responses

Antibiotic resistance continues to rise, yet most new drug candidates act through long-established targets. Faster mode of action (MoA) assessment would enable more effective prioritization of screening hits and help identify compounds with novel mechanisms. In this study, we aimed to develop a scalable framework for MoA inference from antibiotic-induced cellular response profiles in Escherichia coli. We generated a multimodal dataset spanning more than 50 antibiotics, including proteome profiles, chemical structure descriptors, inhibitory concentrations and growth dynamics, and used it to build MAPPER (Mode of Action Prediction via Proteomics-Enhanced Representation), a framework comprising a fixed multimodal predictor and an uncertainty module. MAPPER accurately classified antibiotics across nine mechanistic classes, flagged compounds with likely novel mechanisms and retained predictive power in proteomics-only transfer experiments across mass spectrometry platforms and external data. Together, these results establish MAPPER as an innovative tool for MoA prediction and novelty detection, enabling prioritization of antibacterial candidates with distinct mechanisms.

bioinformatics↗
bioRxiv2026

The Mechanosensitivity of the Regenerative Response in Bone is Retained with Aging in a Mouse Model of Premature Aging.

Aging impairs the regenerative capacity of bone and is associated with poor healing outcomes. The mechanical environment is of fundamental importance to the regenerative response in bone - yet the effect of aging on the mechano-responsive capacity of bone regeneration remains largely unresolved. To investigate age-dependent mechanobiological responses in bone regeneration, we established an experimental framework consisting of: (i) an established femur defect mouse model, (ii) the use of PolgAD257A/D257A (PolgA) mice - a mouse model of premature aging, and (iii) our recently established spatial transcriptomics-based "mechanomics" platform which permits gene expression to be analyzed as a function of the local in vivo mechanical environment. Aging impaired the regenerative response in PolgA mice, resulting in an increased occurrence of delayed and non-unions, delayed bone formation / resorption responses, impaired osteogenesis and delayed mineralization of new bone. Cyclic mechanical loading significantly enhanced the regenerative response in young PolgA mice inducing sustained bone formation, suppressing bone resorption, and enhancing mineralization, with the strongest effects observed in peripheral regions of the fracture site. In aged PolgA mice, the mechanosensitivity of the regenerative response was retained with an anabolic response localized to the defect center. Cyclic mechanical loading applied during the reparative and remodelling phases of fracture healing thus represents a potential translational strategy to harness the mechanosensitivity of aged bone.

physiology↗
bioRxiv2025

Streptavidins play a multifunctional role within a biotin-pathway antibiotic network encoded in a biosynthetic supercluster

Streptavidin, the well-known biotin-binding protein extensively used in biotechnology, is naturally co-produced in Streptomyces avidinii alongside stravidins--inhibitors of biotin biosynthesis. Here, we uncover and activate a conserved genomic region flanked by two streptavidin genes, revealing multiple biosynthetic gene clusters that produce diverse biotin-related metabolites, including stravidins, acidomycin, -methyl-KAPA, -methyldesthiobiotin, and the novel non-proteinogenic amino acid ANDA. We show -methyldesthiobiotin arises from -methyl-KAPA, illustrating how methylated analogues interfere with distinct steps of biotin biosynthesis. Contrary to the view that streptavidin functions solely by sequestering biotin, our biochemical, structural, and bioactivity analyses demonstrate that it also binds acidomycin, neutralizing its antibacterial activity to protect the producer while likely facilitating compound secretion. The crystal structure of the streptavidin-acidomycin complex reveals the molecular basis for this dual functionality. Our findings establish a multifunctional streptavidin that integrates biotin sequestration and self-resistance to balance an antibiotic network targeting the biotin pathway in microbial competition.

microbiology↗
bioRxiv2025

Low risk of transmission of prototype and newly emerged Oropouche virus strains by European Culex pipiens, Aedes albopictus, and Anopheles atroparvus mosquitoes

Oropouche virus (OROV) is an emerging arbovirus of growing public health concern, with increasing incidence and geographic spread. Since its discovery in 1955, OROV has caused multiple outbreaks in South and Central America, with a new introduction in Cuba since May 2024. Recent travel-related cases in Europe and the Americas underscore its potential for global dissemination. Assessing vector competence outside endemic regions is critical in the context of global travel and climate change. We evaluated the vector competence of three mosquito species commonly found in Europe--Culex (Cx.) pipiens, Aedes (Ae.) albopictus, and Anopheles (An.) atroparvus--using two OROV strains: the prototype TRVL9760 (1955, Trinidad and Tobago) and a recent isolate OROV-IRCCS-SCDC_1/2024 (2024, imported from Cuba to Italy). Mosquitoes were orally infected and examined at 7- and 14-days post-infection. We assessed infection (body), dissemination (peripheral tissues), and transmission potential (saliva) by measuring infectious virus particles using the gold standard focus-forming assays. Our findings show that Cx. pipiens and An. atroparvus were not susceptible to infection or did not allow transmission with OROV. In Ae. albopictus, low infection rates were observed: 6.7% of mosquitoes showed infection at day 7 with the prototype strain, and 3.1% at day 14 with OROV-IRCCS-SCDC_1/2024. All infected mosquitoes showed viral dissemination, but none had infectious virus in their saliva, indicating low risk for transmission. These results confirm limited vector competence of European mosquito species for OROV and emphasize the importance of continued entomological surveillance to inform future risk assessments.

microbiology↗
bioRxiv2025

Spatial μProBe: a correlative multimodal imaging approach for spatial profiling of biological micro-environments

Despite fundamental advances in spatial omics, investigating cellular and molecular functions within their native environment remains a challenge in multiscale systems biology, especially in response to organ-level events. Here, we introduce Spatial {micro}ProBe (micro-ProBe), a multimodal imaging approach for spatial profiling of biological micro-environments. Spatial {micro}ProBe enables preprocessing, registration and correlative analysis of 2D and 3D imaging modalities, supported by an intuitive user interface. As an application, we investigated bone mechanobiology and characterised the cellular and molecular responses to mechanical loading during adaptation and regeneration, which continuously regulate the local microarchitecture. By integrating time-lapsed micro-computed tomography and end-point spatial transcriptomics, we profiled the local mechanical in vivo environment of thousands of musculoskeletal cells, revealing the spatiotemporal interplay between local mechanics and gene expression driving tissue development. Spatial {micro}ProBe marks a crucial advance in the characterisation of multiscale tissues and signalling, facilitating the exploration of targeted molecular therapies for pathological conditions.

systems biology↗
bioRxiv2025

Engineering patient-derived organotypic bone models for skeletal disease and osteoanabolic therapy testing

Bone-forming therapies often fail in genetic skeletal disorders, highlighting critical gaps in mechanistic understanding and therapy evaluation. We developed 3D bioprinted organotypic bone models using primary cells from a patient with FKBP10-related osteogenesis imperfecta (OI) and from metabolically healthy controls obtained via femoral osteotomy (FO). Cyclic me-chanical loading and reseeding generated patient-derived bone-like tissue for structural, molecu-lar, and transcriptomic characterization of the engineered donor-specific tissue material. Dick-kopf-1 antibody (DKK1Ab) was then administered as a therapeutic perturbation. OI constructs showed a bidirectional interferon-stimulated gene (ISG) signature and hypermineralization with structural fragility, hallmark features of OI. Unlike FO constructs, DKK1Ab administration in OI resulted in a limited transcriptional response marked by ISG downregulation and increased MKI67 expression. Therapeutic perturbation with DKK1Ab increased early procollagen I se-cretion, and was associated with lower fracture scores, although the within-OI difference was not statistically significant. This proof-of-concept demonstrates multimodal donor-specific char-acterization of engineered patient-derived bone models following DKK1Ab perturbation.

bioengineering↗
bioRxiv2024

Cystobactamid off-target profiling reveals favorable safety, superoxide reduction, and SCARB1 inhibition in eukaryotes

Antimicrobial resistance (AMR) poses a fundamental global threat, necessitating new strategies for effective therapies. Cystobactamids (CYS), a class of antibacterial agents targeting bacterial gyrase and topoisomerase IV, represent a non-traditional chemical scaffold with broad-spectrum activity. For toxicological de-risking, we performed a comprehensive profiling on eukaryotic cells, focusing on cytotoxicity, genotoxicity, and mitochondrial toxicity, demonstrating cellular safety and superoxide scavenging properties. Studies in zebrafish embryos assessed developmental, cardiovascular, and hepatic toxicity, indicating a favorable in vivo safety profile. Metabolism studies revealed glucuronidation and amide bond hydrolysis as key pathways, whereby CYS metabolic stability substantially improved by cobicistat co-treatment. Affinity-based protein profiling identified the cholesterol- and HCV-receptor scavenger receptor class B member 1 (SCARB1) as a primary eukaryotic off-target protein, with cystobactamids shown to inhibit SCARB1s function, preventing hepatitis C virus pseudoparticle entry into cells. These findings suggest a high therapeutic potential for cystobactamids and highlight SCARB1 as a primary eukaryotic target.

pharmacology and toxicology↗
bioRxiv2024

Spatial Transcriptomics in Mechanomics: New Horizons in Exploring the Mechanoregulation of Bone Regeneration

In recent decades, the field of bone mechanobiology has sought experimental techniques to unravel the molecular mechanisms governing the phenomenon of mechanically-regulated fracture healing. Each cell within a fracture site resides within different local micro-environments characterized by different levels of mechanical strain - thus, preserving the spatial location of each cell is critical in relating cellular responses to mechanical stimuli. Our spatial transcriptomics based "mechanomics" platform facilitates spatially-resolved analysis of the molecular profiles of cells with respect to their local in vivo mechanical environment by integrating time-lapsed in vivo micro-computed tomography, spatial transcriptomics, and micro-finite element analysis. We investigate the transcriptomic responses of cells as a function of the local strain magnitude by identifying the differential expression of genes in regions of high and low strain within a fracture site. Our platform thus has the potential to address fundamental open questions within the field and to discover mechano-responsive targets to enhance fracture healing.

physiology↗
bioRxiv2023

Collective cell migration due to guidance-by-followers is robust to multiple stimuli

Collective cell migration is an important process during biological development and tissue repair, but may turn malignant during tumor invasion. Mathematical and computational models are essential to unravel the mechanisms of self-organization that underlie the emergence of collective migration from the interactions among individual cells. Recently, guidance-by-followers was identified as one such underlying mechanism of collective cell migration in the zebrafish embryo. This poses the question how guidance stimuli are integrated when multiple cells interact simultaneously. Here, we extend a recent individual-based model by an integration step of the vectorial guidance stimuli and compare model predictions obtained for various variants of the mechanism (arithmetic mean of stimuli, dominance of stimulus with largest transmission interface, dominance of most head-on stimulus). Simulations are carried out and quantified within the modeling and simulation framework Morpheus. Collective cell migration is sfound to be robust and qualitatively identical for all considered variants of stimulus integration. Moreover, this study highlights the role of individual-based modeling approaches for understanding collective phenomena at the population scale that emerge from cell-cell interactions.

developmental biology↗
bioRxiv2022

Walking bumblebees see faster

The behavioral state of an animal has profound effects on neuronal information processing. Locomotion changes the response properties of visual interneurons in the insect brain, but it is still unknown if it also alters the response properties of photoreceptors. Photoreceptor responses become faster at higher temperatures. It has therefore been suggested that thermoregulation in bees and other insects could improve temporal resolution in vision, but direct evidence for this idea has so far been missing. Here we compared electroretinograms (ERGs) from the compound eyes of tethered bumblebees that were either sitting still or were walking on an air supported ball. We found that the visual processing speed strongly increased when the bumblebees were walking. By monitoring the bumblebees eye temperature during our recordings, we saw that the increase in response speed was in synchrony with a rise of the eye temperature. By artificially heating the bees head, we show that the walking induced temperature increase of the visual system is sufficient to explain the rise in processing speed. We also show that walking accelerates the visual system to the equivalent of a 14-fold increase in light intensity. We conclude that the walking-induced rise in temperature accelerates the processing of visual information in bumblebees, which is an ideal strategy to process the increased information flow during locomotion.

neuroscience↗
bioRxiv2022

Trabecular bone remodeling in the ageing mouse: a micro-multiphysics agent-based in silico model using cell-type-specific mechanomic profiles

Bone remodeling is regulated by the interaction between different cells and tissues across many spatial and temporal scales. Notably, in silico models are regarded as powerful tools to further understand the signaling pathways that regulate this intricate spatial cellular interplay. To this end, we have established a 3D multiscale micro-multiphysics agent-based (micro-MPA) in silico model of trabecular bone remodeling using longitudinal in vivo data from the sixth caudal vertebra (CV6) of PolgA(D257A/D257A) mice, a mouse model of premature aging. Our model includes a variety of cells as single agents and receptor-ligand kinetics, mechanomics, diffusion and decay of cytokines which regulate the cells behavior. We highlighted its capabilities by simulating trabecular bone remodeling in the CV6 of 5 mice over 4 weeks and we evaluated the static and dynamic morphometry of the trabecular bone microarchitecture. Based on the progression of the average trabecular bone volume fraction (BV/TV), we identified a configuration of the model parameters to simulate homeostatic trabecular bone remodeling, here named basal. Crucially, we also produced anabolic, anti-anabolic, catabolic and anti-catabolic responses with an increase or decrease by one standard deviation in the levels of osteoprotegerin (OPG), receptor activator of nuclear factor kB ligand (RANKL), and sclerostin (Scl) produced by the osteocytes. Our results showed that changes in the levels of OPG and RANKL were positively and negatively correlated with the BV/TV values after 4 weeks in comparison to basal levels, respectively. Conversely, changes in Scl levels produced small fluctuations in BV/TV in comparison to the basal state. From these results, Scl was deemed to be the main driver of equilibrium while RANKL and OPG were shown to be involved in changes in bone volume fraction with potential relevance for age-related bone features. Ultimately, this micro-MPA model provides valuable insights into how cells respond to their local mechanical environment and can help to identify critical pathways affected by degenerative conditions and ageing.

bioengineering↗
bioRxiv2022

High-Resolution Magnetization-Transfer Imaging of Post-Mortem Marmoset Brain: Comparisons with Relaxometry and Histology

Cell membranes and macromolecules or paramagnetic compounds interact with water proton spins, which modulates magnetic resonance imaging (MRI) contrast providing information on tissue composition. For a further investigation, quantitative magnetization transfer (qMT) parameters (at 3T), including the ratio of the macromolecular and water proton pools, [F], and the exchange-rate constant as well as the (observed) longitudinal and the effective transverse relaxation rates (at 3T and 7T), [Formula] and [Formula] respectively, were measured at high spatial resolution (200 m) in a slice of fixed marmoset brain and compared to histology results obtained with Gallyas myelin stain and Perls iron stain. [Formula] and [Formula] were linearly correlated with the iron content for the entire slice, whereas distinct differences were obtained between gray and white matter for correlations of relaxometry and qMT parameters with myelin content. The combined results suggest that the macromolecular pool interacting with water consists of myelin and (less efficient) non-myelin contributions. Despite strong correlation of [F] and [Formula] none of these parameters was uniquely specific to myelination. Due to additional sensitivity to iron stores, [Formula] and [Formula] were more sensitive for depicting microstructural differences between cortical layers than [F]. HighlightsO_LIMRI (200m) is correlated with myelin and iron histology in fixed marmoset brain. C_LIO_LIDetailed z-spectra are employed for precise magnetization-transfer (MT) measurements. C_LIO_LILongitudinal and effective transverse relaxation rates depend linearly on tissue iron. C_LIO_LILongitudinal relaxation and MT are not uniquely specific to myelin. C_LIO_LIMyelin and non-myelin macromolecules impact water relaxation and MT contrast. C_LI

neuroscience↗
bioRxiv2022

Natural products lysobactin and sorangicin A show in vitro activity against Mycobacterium abscessus complex

The prevalence of lung disease caused by Mycobacterium abscessus is increasing among patients with cystic fibrosis. M. abscessus is a multidrug resistant opportunistic pathogen that is notoriously difficult to treat due to a lack of efficacious therapeutic regimens. Currently, there are no standard regimens, and treatment guidelines are based empirically on drug susceptibility testing. Thus, novel antibiotics are required. Natural products represent a vast pool of biologically active compounds that have a history of being a good source of antibiotics. Here, we screened a library of 517 natural products purified from fermentations of various bacteria and fungi against M. abscessus ATCC 19977. Lysobactin and sorangicin A were active against the M. abscessus complex and drug resistant clinical isolates. These natural products merit further consideration to be included in the M. abscessus drug pipeline.

microbiology↗
bioRxiv2022

Interference with lipoprotein maturation sensitizes methicillin-resistant Staphylococcus aureus to human group IIA secreted phospholipase A2 and daptomycin.

Methicillin-resistant Staphylococcus aureus (MRSA) has been classified as a high priority pathogen by the World Health Organization underlining the high demand for new therapeutics to treat infections. Human group IIA secreted phospholipase A2 (hGIIA) is among the most potent bactericidal proteins against Gram-positive bacteria, including S. aureus. To determine hGIIA-resistance mechanisms of MRSA we screened the Nebraska Transposon Mutant Library using a sublethal concentration of recombinant hGIIA. We identified and confirmed the role of lspA, encoding the lipoprotein signal peptidase LspA, as a new hGIIA resistance gene in both in vitro assays and an infection model in hGIIA-transgenic mice. Increased susceptibility of the lspA mutant was associated with faster and increased cell wall penetration of hGIIA. Moreover, lspA deletion also increased susceptibility to daptomycin, a last-resort antibiotic to treat MRSA infections. Exposure of MRSA wild-type to the LspA-specific inhibitors globomycin and myxovirescin A1 induced a lspA mutant phenotype with regard to hGIIA and daptomycin killing. Analysis of >26,000 S. aureus genomes showed that LspA is highly sequence-conserved, suggesting that LspA inhibition could be applied universally. The role of LspA in hGIIA resistance was not restricted to MRSA since Streptococcus mutans and Enterococcus faecalis were also more hGIIA-susceptible after lspA deletion or LspA inhibition, respectively. Overall, our data suggest that pharmacological blocking of LspA may disarm Gram-positive pathogens, including MRSA, to enhance clearance by innate host defense molecules and clinically-applied antibiotics.

microbiology↗
bioRxiv2021

Dual signaling via interferon and DNA damage response elicits entrapment by giant PML nuclear bodies

PML nuclear bodies (PML-NBs) are dynamic interchromosomal macromolecular complexes implicated in epigenetic regulation as well as antiviral defense. During herpesvirus infection, PML-NBs induce epigenetic silencing of viral genomes, however, this defense is antagonized by viral regulatory proteins such as IE1 of human cytomegalovirus (HCMV). Here, we show that PML-NBs undergo a drastic rearrangement into highly enlarged PML cages upon infection with IE1-deficient HCMV. Importantly, our results demonstrate that dual signaling by interferon and DNA damage response is required to elicit giant PML-NBs. DNA labeling revealed that invading HCMV genomes are entrapped inside PML-NBs and remain stably associated with PML cages in a transcriptionally repressed state. Intriguingly, by correlative light and transmission electron microscopy (EM), we observed that PML cages also entrap newly assembled viral capsids demonstrating a second defense layer in cells with incomplete first line response. Further characterization by 3D EM showed that hundreds of viral capsids are tightly packed into several layers of fibrous PML. Overall, our data indicate that giant PML-NBs arise via combined interferon and DNA damage signaling which triggers entrapment of both nucleic acids and proteinaceous components. This represents a multilayered defense strategy to act in a cytoprotective manner and to combat viral infections.

microbiology↗
bioRxiv2021

Bone mechanoregulation allows subject-specific load estimation based on time-lapsed micro-CT and HR-pQCT in vivo

Patients at high risk of fracture due to metabolic diseases frequently undergo long-term antiresorptive therapy. However, in some patients treatment is unsuccessful in preventing fractures or causes severe adverse health outcomes. Understanding load driven bone remodelling, i.e. mechanoregulation, is critical to understand which patients are at risk for progressive bone degeneration and may enable better patient selection or adaptive therapeutic intervention strategies. Bone microarchitecture assessment using high-resolution peripheral quantitative computed tomography (HR-pQCT) combined with computed mechanical loads has successfully been used to investigate bone mechanoregulation at the trabecular level. To obtain the required mechanical loads that induce local variances in mechanical strain and cause bone remodelling, estimation of physiological loading is essential. Yet, current models homogenise strain patterns throughout the bone to estimate load distribution in vivo, which may be a flawed assumption for investigating alterations in bone mechanoregulation. By further utilising available spatiotemporal information of time-lapsed bone imaging studies, we developed a mechanoregulation-based load estimation algorithm (MR). MR calculates organ scale loads by scaling and superimposing a set of predefined independent unit loads to optimise measured bone formation in high, quiescence in medium and resorption in low strain regions. We benchmarked our algorithm against a previously published load history algorithm (LH) using synthetic data, micro-CT images of murine vertebrae under defined experimental in vivo loadings and HR-pQCT images from seven patients. Our algorithm consistently outperformed LH in all three datasets. In silico generated time evolutions of distal radius geometries (n = 5) indicated significantly higher sensitivity, specificity, and accuracy for MR than LH (p < 0.01). This increased performance led to substantially better discrimination between physiological and extra-physiological loading in mice (n = 8). Moreover, a significantly (p < 0.01) higher association between remodelling events and computed local mechanical signals were found using MR (CCR = 0.42) than LH (CCR = 0.38) to estimate human distal radius loading. Future applications of MR may enable clinicians to link subtle changes in bone strength to changes in day-to-day loading, identifying weak spots in the bone micro-structure for local intervention and personalised treatment approaches.

bioengineering↗