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Results for “Animal Behavior and Cognition”

Search indexed bioRxiv preprints in genomics, neuroscience, cell biology and bioinformatics. Read source abstracts and check manuscript versions; preprints are not peer reviewed.

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bioRxiv2017

Methods in field chronobiology

Chronobiological research has seen a continuous development of novel approaches and techniques to measure rhythmicity at different levels of biological organization from locomotor activity (e.g. migratory restlessness) to physiology (e.g. temperature and hormone rhythms, and relatively recently also in genes, proteins and metabolites). However, the methodological advancements in this field have been mostly and sometimes exclusively used only in indoor laboratory settings. In parallel, there has been an unprecedented and rapid improvement in our ability to track animals and their behaviour in the wild. However, while the spatial analysis of tracking data is widespread, its temporal aspect is largely unexplored. Here, we review the tools that are available or have potential to record rhythms in the wild animals with emphasis on currently overlooked approaches and monitoring systems. We then demonstrate, in three question-driven case studies, how the integration of traditional and newer approaches can help answer novel chronobiological questions in free-living animals. Finally, we highlight unresolved issues in field chronobiology that may benefit from technological development in the future. As most of the studies in the field are descriptive, the future challenge lies in applying the diverse technologies to experimental set-ups in the wild.

animal behavior and cognition↗
bioRxiv2017

Females prefer cooperative males even when cooperative behavior is unobserved: evidence from the mound-building mouse, Mus spicilegus

Theoretical and empirical studies in humans suggest that cooperative behaviors may act as signals during mate choice. However, cooperation is not always observable by potential partners before mate choice. To address whether cooperative phenotypes are preferred based on cues different from cooperative behaviors per se, we designed an experimental paradigm using wild-born mound-building mice (Mus spicilegus), a species with biparental care. In this species, females cannot observe male cooperative behaviors: mate choice occurs in the spring, whereas mounds are cooperatively built in the fall. We first assessed the variation in mound building investment and identified males exhibiting high and low amounts of cooperation. Second, we presented these males to females during two-way choice tests. As offspring survival relies on mound protection, we hypothesized that mound building could be a form of paternal care and assessed whether cooperative males were more involved in offspring attendance using pup-retrieval experiments. Our results indicate that females were more attracted to highly cooperative males over less cooperative, even when they did not observe them build. This finding suggests that female mate choice is influenced either by cues of cooperativeness different than cooperative behaviors or by preferences for traits associated with cooperativeness. Moreover, male offspring attendance was negatively correlated with cooperativeness, suggesting the potential existence of two alternative paternal strategies in offspring care (mound building versus offspring attendance). Overall, our findings support the existence of preference for cooperative phenotypes in a non-human species and suggest that sexual selection might be involved in the evolution of cooperation.

animal behavior and cognition↗
bioRxiv2017

The Object Space Task for mice and rats

Declarative memory encompasses representations of specific events as well as knowledge extracted by accumulation over multiple episodes. To investigate how these different sorts of memories are created, we developed a new behavioral task in rodents. The task consists of three distinct conditions (stable, overlapping, random). Rodents are exposed to multiple sample trials, in which they explore objects in specific spatial arrangements. In the stable condition, the locations are constant during all sample trials; in the test trial, one objects location is changed. In the random condition, object locations are presented in the sample phase without a specific spatial pattern. In the overlapping condition, one location is shared (overlapping) between all trials while the other location changes during sample trials. We show that in the overlapping condition, instead of only remembering the last sample trial, rodents form a cumulative memory of the sample trials.\n\nHere we could show that both mice and rats can accumulate information across multiple trials and express a long-term abstracted memory.

animal behavior and cognition↗
bioRxiv2017

A longitudinal analysis of men’s intrasexual competitiveness, state anxiety, salivary testosterone, and salivary cortisol

Many previous studies have investigated relationships between mens competitiveness and testosterone. For example, the extent of changes in mens testosterone levels following a competitive task predicts the likelihood of them choosing to compete again. Recent work investigating whether individual differences in mens testosterone levels predict individual differences in their competitiveness have produced mixed results. Consequently, we investigated whether mens (N=59) scores on the Intrasexual Competitiveness Scale were related to either within-subject changes or between-subject differences in mens testosterone levels. Mens responses on the Intrasexual Competitiveness Scale did not appear to track within-subject changes in testosterone. By contrast with one recent study, mens Intrasexual Competitiveness Scale also did not appear to be related to between-individual differences in testosterone. Thus, our results present no evidence for associations between mens testosterone and their responses on the Intrasexual Competitiveness Scale.

animal behavior and cognition↗
bioRxiv2017

Sleep and the gut microbiome: antibiotic-induced depletion of the gut microbiota reduces nocturnal sleep in mice

Several bacterial cell wall components such as peptidoglycan and muramyl peptide are potent inducers of mammalian slow-wave sleep when exogenously administered to freely behaving animals. It has been proposed that the native gut microflora may serve as a quasi-endogenous pool of somnogenic bacterial cell wall products given their quantity and close proximity to the intestinal portal. This proposal suggests that deliberate manipulation of the host's intestinal flora may elicit changes in host sleep behavior. To test this possibility, we evaluated 24 h of sleep-wake behavior after depleting the gut microbiota with a 14 d broad-spectrum antibiotic regimen containing high doses of ampicillin, metronidazole, neomycin, and vancomycin. High-throughput sequencing of the bacterial 16S rDNA gene was used to confirm depletion of fecal bacteria and sleep-wake vigilance states were determined using videosomnography techniques based on previously established behavioral criteria shown to highly correlate with standard polysomnography-based methods. Additionally, considering that germ-free and antibiotic-treated mice have been earlier shown to display increased locomotor activity, and since locomotor activity has been used as a reliable proxy of sleep, we suspected that the elevated locomotor activity previously reported in these animals may reflect an unreported reduction in sleep behavior. To examine this potential relationship, we also quantified locomotor activity on a representative subsample of the same 24 h of video recordings using the automated video-tracking software ANY-maze. We found that antibiotic-induced depletion of the gut microbiota reduced nocturnal sleep, but not diurnal sleep. Likewise, antibiotic-treated mice showed increased nocturnal locomotor activity, but not diurnal locomotor activity. Taken together, these results support a link between the gut microbiome and nocturnal sleep and locomotor physiology in adult mice. Additionally, our findings indicate that antibiotics may be insomnogenic via their ability to diminish gut-derived bacterial somnogens. Given that antibiotics are among the most commonly prescribed drugs in human medicine, these findings have important implications for clinical practice with respect to prolonged antibiotic therapy, insomnia, and other idiopathic sleep-wake and circadian-rhythm disorders affecting an estimated 50-70 million people in the United States alone.\n\nHighlights- 14 d broad-spectrum antibiotic treatment effectively depletes the gut microbiota.\n- Gut microbiota depletion reduces nocturnal sleep, but not diurnal sleep.\n- Gut microbiota depletion increases nocturnal locomotion, but not diurnal locomotion.\n- Antibiotics may be insomnogenic: implications for idiopathic sleep disorders.

animal behavior and cognition↗
bioRxiv2017

Egg viability decreases rapidly with time since ovulation in the rainbow darter: implications for the costs of choosiness

Egg viability in the rainbow darter Etheostoma caeruleum, a fish apparently lacking female mate choice, was found to decline rapidly after ovulation. We observed that the majority of a females clutch may fail to hatch if she is prevented from mating for as little as six hours. These data suggest that exercising female mate preferences may be selectively disfavoured in E. caeruleum due to the high cost of delaying mating.

animal behavior and cognition↗
bioRxiv2017

Open Source LED controller for circadian experiments

Controlling the light conditions when performing a circadian experiment is a key factor. In this article a simple, affordable and open source LED controller is presented. Using commercial available solutions like and Arduino [1] and LED stripes the cost is dramatically reduced.

animal behavior and cognition↗
bioRxiv2017

An automated barcode tracking system for behavioural studies in birds

O_LIRecent advances in technology allow researchers to automate the measurement of animal behaviour. These methods have multiple advantages over direct observations and manual data input as they reduce bias related to human perception and fatigue, and deliver more extensive and complete data sets that enhance statistical power. One major challenge that automation can overcome is the observation of many individuals at once, enabling whole-group or whole-population tracking.\nC_LIO_LIWe provide a detailed description for implementing an automated system for tracking birds. Our system uses printed, machine-readable codes mounted on backpacks. This simple, yet robust, tagging system can be used simultaneously on multiple individuals to provide data on bird identity, position and directionality. Further, because our codes and backpacks are printed on paper, they are very lightweight.\nC_LIO_LIWe describe the implementation of this automated system on two flocks of zebra finches. We test different camera options, and describe their advantages and disadvantages. We show that our method is reliable, relatively easy to implement and monitor, and with proper handling, has proved to be safe for the birds over long periods of time. Further, we highlight how using single-board computers to control the frequency and duration of image capture makes this system affordable, flexible, and adaptable to a range of study systems.\nC_LIO_LIThe ability to automate the measurement of individual positions has the potential to significantly increase the power of both observational and experimental studies. The system can capture both detailed interactions (using video recordings) and repeated observations (e.g. once per second for the entire day) of individuals over long timescales (months or potentially years). This approach opens the door to tracking life-long relationships among individuals, while also capturing fine-scale differences in behaviour.\nC_LI

animal behavior and cognition↗
bioRxiv2017

Memory Guides the Comprehension of Event Changes for Older and Younger Adults

Two experiments examined adult age differences in the use of memory to comprehend changes in everyday activities. Participants viewed movies depicting an actor performing activities on two fictive days in her life. Some activities were repeated across days, other activities were repeated with a changed feature (e.g., waking up to an alarm clock or a phone alarm), and a final set of activities was performed on Day 2 only. After a one-week delay, participants completed a cued recall test for the activities of Day 2. Unsurprisingly, exact repetition boosted final recall. More surprising, features that changed from Day 1 to Day 2 were remembered approximately as well as features that were only presented on Day 2--showing an absence of proactive interference and in some cases proactive facilitation. Proactive facilitation was strongly related to participants ability to detect and recollect the changes. Younger adults detected and recollected more changes than older adults, which in part explained older adults differential deficit in memory for changed activity features. We propose that this pattern may reflect observers use of episodic memory to make predictions during the experience of a new activity, and that when predictions fail, this triggers processing that benefits subsequent episodic memory. Disruption of this chain of processing could play a role in age-related episodic memory deficits.

animal behavior and cognition↗
bioRxiv2017

Anxiety-like but not despair-like behaviors are further aggravated by chronic mild stress in the early stages of APPswe/PS1dE9 transgenic mice

Early Alzheimers disease (AD) and depression share many symptoms, thus it is very difficult to initially distinguish one from the other. Therefore, characterizing the shared and different biological changes between the two disorders will be helpful in making an early diagnosis and planning treatment. In the present study, 8-week-old APPswe/PS1dE9 transgenic mice received chronic mild stress (CMS) for 8 weeks followed by a series of behavioral, biochemical and pathological analyses. APPswe/PS1dE9 mice demonstrated despair- and anxiety-like behaviors, and reduced sociability, accompanied by high levels of soluble beta-amyloid, glial activation, neuroinflammation and brain derived neurotrophic factor signaling disturbance in the hippocampus. Notably, APPswe/PS1dE9 mice exposure to CMS further aggravated anxiety-like behaviors rather than hopelessness and sociability deficits, accompanied with more severe neuroinflammation, and low serum corticosterone increased to the normal level. These results may help to understand the pathogenic mechanism of psychiatric symptoms associated with early AD.

animal behavior and cognition↗
bioRxiv2017

A miniaturized threshold-triggered acceleration data-logger for recording burst movements of aquatic animals

Animal-borne accelerometers are effective tools for quantifying the kinematics of animal behaviors, such as swimming, running, and flying, under natural conditions. However, quantifying burst movements of small and agile aquatic animals (e.g., small teleost fish), such as during predatory behavior, or while fleeing, remains challenging. To capture the details of burst movements, accelerometers need to sample at a very high frequency, which will inevitably shorten the duration of the recording or increase the size of the device. To overcome this problem, we developed a high-frequency acceleration data-logger that can be triggered by a manually-defined acceleration threshold, thus allowing the selective measurement of animal burst movements. We conducted experiments under laboratory and field conditions to examine the performance of the logger. The laboratory experiment using red seabream (Pagrus major) showed that the new logger could measure the kinematics of their escape behaviors (i.e., body beat cycles and maximum acceleration values). The field experiment using free-swimming yellowtail kingfish (Seriola lalandi) showed that the loggers trigger correctly (i.e., of the 18 burst movements, 17 were recorded by the loggers). We suggest that this new logger can be applied to measure the burst movements of various small and agile animals, whose movements may be otherwise difficult to measure.

animal behavior and cognition↗
bioRxiv2017

The scent of the fly

(Z)-4-undecenal (Z4-11Al) is the volatile pheromone produced by females of the vinegar fly Drosophila melanogaster. Female flies emit Z4-11Al for species-specific communication and mate-finding. A sensory panel finds that synthetic Z4-11Al has a characteristic flavour, which we perceive even at the small amounts produced by one female fly. Since only females produce Z4-11Al, and not males, we can reliably distinguish between single D. melanogaster males and females, according to their scent. Females release Z4-11Al at 2.4 ng/h and we readily sense 1 ng synthetic Z4-11Al in a glass of wine (0.03 nmol/L), while a tenfold concentration is perceived as a loud off-flavour. This corroborates the observation that a glass of wine is spoilt by a single D. melanogaster fly falling into it, which we here show is caused by Z4-11Al. The biological role of Z4-11Al or structurally related aldehydes in humans and the basis for this semiochemical convergence remains yet unclear.

animal behavior and cognition↗
bioRxiv2017

Controlled ocular radiance in a diurnal fish looking at prey

1.Active sensing using light, or active photolocation, is only known from deep sea and nocturnal fish with chemiluminescent \"search\" lights. Bright irides in diurnal fish species have recently been proposed as a potential analogue. Here, we contribute to this discussion by testing whether iris radiance is actively modulated. The focus is on behaviourally controlled iris reflections, called \"ocular sparks\". The triplefin Tripterygion delaisi can alternate between red and blue ocular sparks, allowing us to test the prediction that spark frequency and hue depend on background hue and prey presence. In a first experiment, we found that blue ocular sparks were significantly more often \"on\" against red backgrounds, and red ocular sparks against blue backgrounds, particularly when copepods were present. A second experiment tested whether hungry fish showed more ocular sparks, which was not the case. Again, background hue resulted in differential use of ocular spark types. We conclude that iris radiance through ocular sparks in T. delaisi is not a side effect of eye movement, but adaptively modulated in response to the context under which prey are detected. We discuss the possible alternative functions of ocular sparks, including an as yet speculative role in active photolocation.

animal behavior and cognition↗
bioRxiv2017

Polarization Vision: Overcoming Challenges of Working with a Property of Light We Barely See

In recent years, the study of polarization vision in animals has seen numerous breakthroughs, not just in terms of what is known about the function of this sensory ability, but also in the experimental methods by which polarization can be controlled, presented and measured. Once thought to be limited to only a few animal species, polarization sensitivity is now known to be widespread across many taxonomic groups, and advances in experimental techniques are, in part, responsible for these discoveries. Nevertheless, its study remains challenging, perhaps because of our own poor sensitivity to the polarization of light, but equally as a result of the slow spread of new practices and methodological innovations within the field. In this review, we introduce the most important steps in designing and calibrating polarized stimuli, within the broader context of areas of current research and the applications of new techniques to key questions. Our aim is to provide a constructive guide to help researchers, particularly those with no background in the physics of polarization, to design robust experiments that are free from confounding factors.

animal behavior and cognition↗
bioRxiv2017

Effects of gamification and active listening on short-term sound localization training in virtual reality

Head-related transfer functions (HRTFs) capture the direction-dependant way that sound interacts with the head and torso. In virtual audio systems, which aim to emulate these effects, non-individualized, generic HRTFs are typically used leading to an inaccurate perception of virtual sound location. Training has the potential to exploit the brains ability to adapt to these unfamiliar cues. In this study, three virtual sound localization training paradigms were evaluated; one provided simple visual positional confirmation of sound source location, a second introduced game design elements ("gamification") and a final version additionally utilized head-tracking to provide listeners with experience of relative sound source motion ("active listening"). The results demonstrate a significant effect of training after a small number of short (12-minute) training sessions, which is retained across multiple days. Gamification alone had no significant effect on the efficacy of the training, but active listening resulted in a significantly greater improvements in localization accuracy. In general, improvements in virtual sound localization following training generalized to a second set of non-individualized HRTFs, although some HRTF-specific changes were observed in polar angle judgement for the active listening group. The implications of this on the putative mechanisms of the adaptation process are discussed.

animal behavior and cognition↗
bioRxiv2017

Learning to perform auditory discriminations from observation is efficient but less robust than learning from experience

Social learning enables complex societies. However, it is largely unknown how insights obtained from observation compare with insights gained from trial-and-error, in particular in terms of their robustness. We use aversive reinforcement to train \"experimenter\" zebra finches to discriminate between auditory stimuli in the presence of an \"observer\" finch. We find that experimenters are slow to successfully discriminate the stimuli but immediately generalize their ability to a new set of similar stimuli. By contrast, observers subjected to the same task instantly discriminate the initial stimulus set, but require more time for successful generalization. Drawing upon machine learning insights, we suggest that observer learning has evolved to rapidly absorb sensory statistics without pressure to minimize neural resources, whereas learning from experience is endowed with a form of regularization that enables robust inference.

animal behavior and cognition↗
bioRxiv2017

Retinal specializations to a micro-predatory and crypto-benthic life-style in the Mediterranean triplefin blenny Tripterygion delaisi

The environment and lifestyle of a species are known to exert selective pressure on the visual system, often demonstrating a tight link between visual morphology and ecology. Many studies have predicted the visual requirements of a species by examining the anatomical features of the eye. However, among the vast number of studies on visual specializations in aquatic animals, only a few have focused on small benthic fishes that occupy a heterogeneous and spatially complex visual environment. This study investigates the general retinal anatomy including the topography of both the photoreceptor and ganglion cell populations and estimates the spatial resolving power of the eye of the Mediterranean triplefin Tripterygion delaisi. Retinal wholemounts were prepared to systematically and quantitatively analyze photoreceptor and retinal ganglion cell densities using design-based stereology. To further examine the retinal structure, we also used magnetic resonance imaging and histological examination of retinal cross sections. Observations of the triplefin's eyes revealed them to be highly mobile, allowing them to view the surroundings without body movements. A rostral aphakic gap and the elliptical shape of the eye extend its visual field rostrally and allow for a rostro-caudal accommodatory axis, enabling this species to focus on prey at close range. Single and twin cones dominate the retina and are consistently arranged in one of two regular patterns, which may enhance motion detection and color vision. The retina features a prominent, dorso-temporal, convexiclivate fovea with an average density of 104,400 double and 30,800 single cones per mm2, and 81,000 retinal ganglion cells per mm2. Based on photoreceptor spacing, spatial resolving power was calculated to be between 6.7 and 9.0 cycles per degree. Location and resolving power of the fovea would benefit the detection and identification of small prey in the lower frontal region of the visual field.

animal behavior and cognition↗
bioRxiv2017

Early Detection of Apathetic Phenotypes in Huntington’s Disease Knock-in Mice Using Open Source Tools

Apathy is one of the most prevalent and progressive psychiatric symptom in Huntingtons disease (HD) patients. However, preclinical work in HD mouse models tend to focus on molecular and motor, rather than affective, phenotypes. Measuring behavior in mice often produces noisy data and requires large cohorts to detect phenotypic rescue with appropriate power. The operant equipment necessary for measuring affective phenotypes is typically expensive, proprietary to commercial entities, and bulky which can render adequately sized mouse cohorts as cost-prohibitive. Thus, we describe here a home-built open-source alternative to commercial hardware that is reliable, scalable, and reproducible. Using off-the-shelf hardware, we adapted and built several of the rodent operant buckets (ROBucket) designed to test HttQ111/+ mice for attention deficits in fixed ratio (FR) and progressive ratio (PR) tasks. We find that, despite normal performance in reward attainment in the FR task, HttQ111/+ mice exhibit reduced PR performance at 9-11 months of age, suggesting motivational deficits. We replicated this in two independent cohorts, which demonstrates the reliability and utility of both the apathetic phenotype, and these ROBuckets, for preclinical HD studies.

animal behavior and cognition↗