Interspecific social contacts spread gut microbiota in wild rodent communities

Raulo, A.; Hanski, E.; Lamberth, C.; Firth, J. A.; Knowles, S. C.

doi:10.64898/2026.11.04.764353

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bioRxiv · 10.64898/2026.11.04.764353

Interspecific social contacts spread gut microbiota in wild rodent communities

Raulo, A.·Hanski, E.·Lamberth, C.·Firth, J. A.·Knowles, S. C.

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Abstract

Background: The mammalian gut microbiota influences a wide array of host phenotypes and varies substantially among individuals. Among conspecifics, microbiota composition is strongly shaped by microbial transmission through social interactions, yet the extent to which such transmission also occurs across species boundaries remains poorly understood. Here, we combine high-resolution tracking data collected over more than 10 months with gut microbiota profiling to examine social associations, space use, and microbiota similarity among individuals of three sympatric rodent species - wood mice (Apodemus sylvaticus), yellow-necked mice (A. flavicollis) and bank voles (Myodes glareolus), in two woodlands. By integrating multi-species social networks and spatial overlap with individual microbiota data, we test how both conspecific and interspecific interactions shape gut microbiota composition. Results: At both study sites, social associations strongly predicted microbiota similarity among conspecific individuals, whereas spatial proximity consistently predicted microbiota similarity among interspecific pairs. In addition, social associations between mice of different species predicted microbiota similarity, although this effect was weaker than that observed within species and was asymmetric, with evidence for stronger microbial transmission from wood mice to yellow-necked mice than vice versa. By focusing on species-indicative bacterial taxa, we further show that wood mice with more social connections to yellow-necked mice harboured a greater richness of gut bacteria typical of yellow-necked mice. Conclusions: Together, these results demonstrate that individual-level social behaviour can influence gut microbial transmission across species boundaries, particularly among closely related species with overlapping ecological niches. Interspecific social interactions may therefore represent an underappreciated pathway for the acquisition of novel gut symbionts in multi-species communities.

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Raulo, A., Hanski, E., Lamberth, C., Firth, J. A., Knowles, S. C.. 2026-11-06. Interspecific social contacts spread gut microbiota in wild rodent communities. https://doi.org/10.64898/2026.11.04.764353

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