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bioRxiv · 10.64898/2026.09.28.755045

Drainage water management reduces nutrient, Escherichia coli, and antibiotic resistance gene export

Thrift-Cahall, E. M.·Tank, J. L.·Mahl, U. H.·Liddick, M. J.·Badilla-Aguilar, A.·Bibby, K.
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Abstract

Subsurface tile drainage rapidly transports nutrients and biological contaminants to surface waters, yet multi-year evaluations of drainage water management (DWM) effects on nutrients, Escherichia coli, and antibiotic resistance genes (ARGs) remain limited. A paired-field design with high-frequency soil moisture monitoring was used to quantify water yield, dissolved nitrogen, phosphorus, and Escherichia coli (E. coli) over seven and eight water years, and ARGs (tetM, tetW, ermB, sul1) over two years in southern Michigan. Soil moisture at tile depth (~75 cm) was higher under controlled drainage, confirming that DWM increases field water-holding capacity. Compared to the free drainage field, DWM reduced cumulative tile discharge by 43% and annual nutrient yields by 46-83% for nitrate and 12-82% for soluble reactive phosphorus, but effects on ammonium were variable. Average daily nutrient yields declined by ~50% over the study period, driven primarily by managed periods. Nutrient concentrations did not differ between treatments, indicating that yield reductions resulted from decreased water loss. Mean daily E. coli yields declined by 71% over the study period, and concentrations were 46% lower under controlled drainage. Controlled drainage reduced tetM and sul1 ARG concentrations and yields during managed periods and throughout the study; however, sensitivity analyses showed that these effects were strongly influenced by a high-precipitation event. After excluding the event, differences in ARG concentrations were no longer detected, although ARG yields remained 43% lower during managed periods. These findings highlight the potential for DWM to mitigate nutrient, microbial, and antibiotic resistance transport from agricultural drainage systems.

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Thrift-Cahall, E. M., Tank, J. L., Mahl, U. H., Liddick, M. J., Badilla-Aguilar, A., Bibby, K.. 2026-10-02. Drainage water management reduces nutrient, Escherichia coli, and antibiotic resistance gene export. https://doi.org/10.64898/2026.09.28.755045

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