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bioRxiv · 10.64898/2026.07.06.736689

Widespread but cryptic introgression shapes genetic diversity in natural populations

Lavanchy, G.·Ruedi, L.·Broennimann, O.·Jecha, K.·Tzivanopoulou, M.·Goudet, J.·Schwander, T.
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Abstract

Introgression following hybridization is increasingly recognized as a major driver of evolution. However, its importance depends on its frequency in nature, which remains to be quantified. To address this, we provide a snapshot of ongoing introgression in a whole species assemblage (4126 ant colonies). 23% of all 82 local species show signs of introgression, which is more than twice previous estimates. Introgression is typically subtle, yet contributes measurably to genetic diversity. Species divergence, rather than classical prezygotic reproductive barriers (mating phenology, ecological niche, fine-scale habitat use) constrains introgression, suggesting that the main reproductive barriers are postzygotic at this stage of divergence. Our results indicate that introgression may be a common but often overlooked feature of natural communities.

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Lavanchy, G., Ruedi, L., Broennimann, O., Jecha, K., Tzivanopoulou, M., Goudet, J., Schwander, T.. 2026-07-08. Widespread but cryptic introgression shapes genetic diversity in natural populations. https://doi.org/10.64898/2026.07.06.736689

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