Ancestral Genome Reconstruction.

Siguret, C.; Olivier, M.; Huneau, C.; SOW, M. D.; Stenger, P.-L.; Klopp, C.; Martin, M.-L.; Tamby, J.-P.; Civan, P.; Pont, C.; Mathieu, O.; SALSE, J.

doi:10.64898/2026.04.16.718917

bioRxiv · 10.64898/2026.04.16.718917

Ancestral Genome Reconstruction.

Siguret, C.·Olivier, M.·Huneau, C.·SOW, M. D.·Stenger, P.-L.·Klopp, C.·Martin, M.-L.·Tamby, J.-P.·Civan, P.·Pont, C.·Mathieu, O.·SALSE, J.

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Abstract

AGR, for Ancestral Genome Reconstruction, is an automatic publicly available and open-source pipeline to infer paleogenomes from modern species genome comparisons exploiting the concept of inter-species chromosomal synteny relationships hierarchical clustering that can be used to unveil how ancestral genomes, genes, sequences and functions have been shaped during million years of present-day plant evolution.

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Siguret, C., Olivier, M., Huneau, C., SOW, M. D., Stenger, P.-L., Klopp, C., Martin, M.-L., Tamby, J.-P., Civan, P., Pont, C., Mathieu, O., SALSE, J.. 2026-04-16. Ancestral Genome Reconstruction.. https://doi.org/10.64898/2026.04.16.718917

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