Nematicidal indole oxazoles and chemoattractants from soil bacteria

Ryan, K. T.; Duncan, J. M.; Thomas, C. S.; Chevrette, M. G.; DenHartog, M. L.; Labby, K. J.; Klein, J.; Zamanian, M.; Handelsman, J.

doi:10.64898/2026.01.20.700618

bioRxiv · 10.64898/2026.01.20.700618

Nematicidal indole oxazoles and chemoattractants from soil bacteria

Ryan, K. T.·Duncan, J. M.·Thomas, C. S.·Chevrette, M. G.·DenHartog, M. L.·Labby, K. J.·Klein, J.·Zamanian, M.·Handelsman, J.

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Abstract

Ecological interactions between bacteria and nematodes in many environments provide a basis for the prediction that diverse bacteria produce anti-nematode compounds. The discovery of microbial secondary metabolites with broad-spectrum nematostatic or nematicidal properties can be hastened by drug screening approaches that include several nematode species and phenotypes. We cultured a collection of 22 soil-derived bacterial isolates that carry in their genomes putative pathways for production of unknown secondary metabolites. Isolates were cultured in various media to enhance natural product diversity and yield, and we evaluated culture filtrates for activity against two evolutionarily distinct nematode species: Clade V free-living nematode Caenorhabditis elegans and Clade III mammalian parasitic nematodes in the genus Brugia. Partitioned extracts from Pseudomonas sp. strain TE4607 stunted C. elegans development and caused motility defects in both blood-circulating larval and adult stages of Brugia. The primary active compound was identified as labradorin 1, an indole with known antibacterial and anticancer properties that had not been previously described as affecting nematodes. Notably, filtrates of Pseudomonas sp. TE4607 cultures attracted free-living nematodes in sensory assays, adding to evidence that certain Pseudomonas species modulate the behavior of free-living nematodes. These findings underscore the need to further explore the link between nematode sensory responses and whole-organism effects of microbial metabolites, with potential applications in anthelmintic discovery. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=100 SRC="FIGDIR/small/700618v1_ufig1.gif" ALT="Figure 1"> View larger version (21K): org.highwire.dtl.DTLVardef@1909e29org.highwire.dtl.DTLVardef@17f9badorg.highwire.dtl.DTLVardef@c59d79org.highwire.dtl.DTLVardef@1e5abbf_HPS_FORMAT_FIGEXP M_FIG C_FIG

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Ryan, K. T., Duncan, J. M., Thomas, C. S., Chevrette, M. G., DenHartog, M. L., Labby, K. J., Klein, J., Zamanian, M., Handelsman, J.. 2026-01-20. Nematicidal indole oxazoles and chemoattractants from soil bacteria. https://doi.org/10.64898/2026.01.20.700618

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