Search bioRxiv⌕ Search

bioRxiv · 10.64898/2026.01.18.700221

When Randomness Becomes Rigid: Dynamic Connectivity Entropy and Symptom-Linked Network Dysfunction in Schizophrenia

Abstract

High dimensionality of dynamic functional connectivity (dFNC) data representation complicates clinical interpretation and biomarker discovery. We propose a new complementary analytical framework based on dynamic inter-network connectivity entropy (DICE) and its potential use as a biomarker of mental illness. Our framework shows that DICE features extend beyond patient-control discrimination, revealing distinct pathophysiological signatures and differential associations with symptom dimensions. Using resting-state fMRI data from 311 participants, 160 controls, 151 schizophrenia (SZ) patients, we identified 53 intrinsic networks, computed DICE and derived three families of DICE-based metrics: (i) entropy level and range, (ii) distributional shape and temporal organization, (iii) entropy-state repertoire and occupancy. These measures revealed a multidimensional signature of altered entropy dynamics in SZ: (1) elevated baseline entropy with reduced fluctuation magnitude and reduced entropy acceleration; (2) reduced temporal persistence of entropy excursions and entropy distributions closer to Gaussian; and (3) a narrowed repertoire of entropy states, prolonged time in near-baseline entropy configurations. The DICE-based metrics within the SZ group show different associations with symptom dimensions. Reduced fluctuation magnitude and acceleration were associated with greater PANSS general symptom severity (disturbance of volition and preoccupation). Reduced deviation from Gaussianity was associated with higher PANSS positive severity (delusions and hallucinations). Reduced temporal persistence was associated with multiple PANSS positive, negative, and general symptoms. Reduced entropy-state diversity and prolonged dwell time in near-baseline states were associated with depression and PANSS positive/general severity, respectively. The multidimensional pathophysiology revealed through the different entropy patterns may potentially guide biomarker development and personalized treatments.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Maksymchuk, N., Miller, R. L., Iraji, A., Calhoun, V. D.. 2026-01-26. When Randomness Becomes Rigid: Dynamic Connectivity Entropy and Symptom-Linked Network Dysfunction in Schizophrenia. https://doi.org/10.64898/2026.01.18.700221

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

The Unreasonable Effectiveness of Cell Types in Describing Neuronal Physiological Features

Single-cell RNA sequencing (scRNA-seq) captures detailed gene expression profiles at scale, while patch-clamp recordings measure intrinsic neuronal electrophysiological properties. Modeling the relations between these two modalities remains a challenge. Here, we compare how well electrophysiological features can be predicted by traditional transcriptomic cell type classification, representations derived from a foundational model (scGPT) pretrained on large-scale scRNA-seq datasets, ion channel-coding genes, and highly variable genes. Using paired transcriptomic and electrophysiological patch-sequencing data from 495 human neurons from neurosurgical tissue, we find that cluster-level cell type representations consistently outperform highly variable gene selection, ion channel gene selection, and context-enriched scGPT embeddings. Notably, performance varies across model architectures and initializations, and the best results are obtained by combining the outputs of separate cell type and scGPT-based models. Together, these findings suggest that traditional discrete cellular classification is highly effective in predicting physiological features. For maximum performance it can be complemented by pretrained transformer models.

neuroscience↗

A nonlinear inhibition pathway underlying cortical responses to tuned holographic optogenetic perturbations

Optogenetics enables causal manipulation of cortical activity. Perturbation responses can be counterintuitive due to network interactions, making theory essential for predicting them. Existing approaches often rely on linear approximations, which fail for many biologically relevant perturbations. Here we develop a nonlinear theory of responses to holographic perturbations in cell-type-specific recurrent networks with structured connectivity. We fit a nonlinear model to mouse V1 data, which shows cotuned-ensemble suppression: perturbing spatially clustered neurons with similar preferred orientations yields markedly stronger short-range suppression than perturbing untuned ensembles. We show that cotuned-ensemble suppression arises from a feature-tuned, nonlinear inhibition pathway implicating somatostatin-positive (SST) interneurons. The theory predicts that cotuned ensembles suppress parvalbumin-positive (PV) neurons but facilitate SST neurons, and links the degree of cotuned-ensemble suppression or facilitation to the variance of the SST response. This framework identifies mechanisms by which nonlinear inhibition sculpts cortical dynamics and establishes a predictive basis for targeted optogenetic interventions.

neuroscience↗

Proteomic signatures of APOE ε4 across human tissues and cell types in Alzheimers disease

The apolipoprotein E {varepsilon}4 (APOE {varepsilon}4) allele is the strongest genetic risk factor for late-onset Alzheimers disease (AD). However, the underlying molecular mechanisms remain unclear. This study included 1691 participants from the Religious Orders Study and Rush Memory and Aging Project (ROSMAP), 1226 participants from the Accelerating Medicines Partnership - Alzheimers Disease (AMP-AD) Diverse Cohorts Study, and 735 participants from the Alzheimers Disease Neuroimaging Initiative (ADNI). To characterise APOE {varepsilon}4 molecular effects, we analysed proteomic data from plasma, cerebrospinal fluid (CSF), and induced pluripotent stem cell (iPSC)-derived astrocytes and neurons, as well as transcriptomic and proteomic data from multiple brain regions. The association of APOE {varepsilon}4 with AD neuropathology was also examined. APOE {varepsilon}4 carriers shared a plasma proteomic signature enriched for immune processes, irrespective of AD diagnosis. A machine learning classifier trained on this signature discriminated APOE {varepsilon}4 carriers from non-carriers in an independent cohort using CSF proteomics. APOE {varepsilon}4 carriage was associated with higher Braak stages and Consortium to Establish a Registry for Alzheimers Disease (CERAD) score. However, only limited APOE {varepsilon}4-associated transcriptomic and proteomic changes were observed in bulk brain tissue, with poor cross-layer concordance. Proteomic analyses of iPSC-derived astrocytes and neurons further revealed cell-type-specific APOE {varepsilon}4-associated changes. APOE {varepsilon}4 is associated with a consistent proteomic signature across plasma and CSF. Its molecular effects in the brain differ across cell types, brain regions and molecular layers. These findings support the need for cell-type-resolved multi-omic studies to elucidate how APOE {varepsilon}4 confers AD risk.

neuroscience↗