Search bioRxiv⌕ Search

bioRxiv · 10.64898/2025.12.17.694952

Notch receptors involved in the choice between intestinal secretory and enterocytes and differentiation of Bestrophin 4 cells.

Abstract

During the first half of embryogenesis, the intestinal epithelium is a simple layer of cuboidal cells surrounded by lateral plate splanchnic mesoderm. As embryogenesis proceeds, the epithelium differentiates to include a variety of enterocytes and secretory cells. During the period of epithelial cell differentiation a number of signaling pathways are used to generate the full complement of cell types. Notch signaling is important for the choice between enterocytes and secretory cells. Following the initial choice, both enterocytes and secretory cells continue differentiating into a number of different subtypes of each cell type. In the zebrafish embryo, Notch signaling is utilized at least three times during development of the intestinal epithelium. The first two Notch signaling events are involved in the choice between enterocytes and secretory cells, while the third involves differentiation of a unique cell type that we previously called Notch Receiving Secretory Cells (NRSCs). While we have identified the times when Notch signaling is active, the individual Notch receptors used in each signaling event have not been previously identified. Here we use loss of function mutants in the four Notch receptors (notch 1a, 1b, 2, and 3) to identify which are used in the each of the Notch signaling events. We find redundant use of Notch receptors in the choice between enterocytes and secretory cells with loss of combinations of either notch 2 and notch 3 or notch 2 and notch 1b but not loss of individual receptors resulting in changes to secretory cell numbers. During the Notch signaling event following the choice between secretory and enterocytes, we identify NRSCs as Bestrophin 4 (BEST4+) cells. In contrast to the choice between secretory and enterocyte cells, we find that loss of individual Notch receptors result in differing numbers of BEST4+ cells. Even though loss of individual receptors affect BEST4+ numbers we suggest that combinations of Notch receptors play a role in differentiation of different BEST4+ subtypes. HighlightsO_LIRequirements for the choice between secretory and enterocytes within the intestinal epithelium require Notch2/Notch3 and Notch2/Notch1b combinations. C_LIO_LINotch 2 and Notch1b are required for Bestropin 4 (BEST4+) cell development. C_LIO_LICombinations of Notch2, Notch1b, and Notch3 may play roles in formation of different BEST4+ subtypes. C_LI

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Allayati, S., Sutradhar, P., Prochaska, M., Maney, L., Choy, C., Swartz, A., Wallace, K.. 2025-12-19. Notch receptors involved in the choice between intestinal secretory and enterocytes and differentiation of Bestrophin 4 cells.. https://doi.org/10.64898/2025.12.17.694952

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

Transposable Elements Profiling Reveals DUXA-associated MLT1D Endogenous Retroviral Elements Activation During Bovine Maternal to Zygotic Transition

Transposable elements (TEs) are a major source of genomic diversity in mammals, yet their regulatory roles in the bovine genome remain poorly understood. Through characterizing bovine TE landscape, despite the substantial proportion (25.6%) of ruminant-specific TEs, we observe age- and class-dependent genomic distribution patterns similar to those observed in other mammals. Next, we profile TE and gene expression dynamics in pre-implantation embryos generated in vivo (IVV), by in vitro fertilization (IVT), and through somatic cell nuclear transfer (SCNT). The zygotic genome activation (ZGA) is shifted from the 4-cell stage to the 8-cell stage in IVT and SCNT embryos compared to IVV embryos. SCNT embryos exhibit impaired initiation of early transcription programs at the 4-cell stage and disrupted developmental trajectories, including abnormal activation of pluripotency-associated genes. A subset of retroviral LTR elements are strongly activated at ZGA in IVV and IVT embryos, whereas their activation is markedly muted in SCNT embryos, suggesting that impaired gene and TE reprogramming may contribute to the developmental defects commonly observed in SCNT embryos. By epigenomic profiling, the MLT1D elements from the ERVL-MaLR LTR family lose repressive marks and gain H3K27ac at ZGA, together with DUXA-binding motif enrichment. Knockdown of DUXA in bovine embryos significantly reduced MLT1D expression and ZGA marker genes. We propose that a subset of DUXA-enriched MLT1D functions as enhancers that promote ZGA. Overall, our study provides new insights into the regulatory roles of TEs during bovine embryogenesis and establishes a framework for comparative studies of TE-mediated gene regulation in early mammalian development.

developmental biology↗

Distinct transcriptional responses to mild cold versus warm temperatures in adult Drosophila melanogaster ovaries

Temperature influences fertility across diverse organisms, yet the mechanisms underlying how suboptimal temperatures affect gamete production and quality remain largely unknown. We previously showed that chronic exposure of adult Drosophila melanogaster females to mild cold promotes the maintenance of germline stem cells (GSCs) and high oocyte quality over time despite reducing the rates of oogenesis, while exposure to warm temperature causes death of early germline cysts and vitellogenic follicles and a severe decrease in oocyte quality. To explore potential mechanisms underlying these highly distinct responses, we compared the ovarian transcriptomes of females maintained at these temperatures (18{degrees}C or 29{degrees}C) to that of 25{degrees}C controls. We found that 18{degrees}C upregulates or downregulates ~2.5 times as many genes as 29{degrees}C, indicating that the ovary mounts active physiological responses to mild cold and warm temperatures--as opposed to simply undergoing passive changes driven by thermodynamics. Gene set enrichment analysis revealed modulation of genes involved in neuronal signaling in opposite directions at 18{degrees}C versus 29{degrees}C. Most genes, however, exhibit temperature-specific regulation: 29{degrees}C upregulates synaptic transmission genes and downregulates lipid biosynthesis genes, whereas 18{degrees}C upregulates actin cytoskeleton genes and downregulates cell adhesion and lipid organization genes. Notably, mild cold or warm temperature specifically modulated (either up or down) the expression of distinct sets of transposable elements (TEs), suggesting the existence of temperature-dependent TE regulatory mechanisms and/or downstream effects. Finally, we show that GSCs at 18{degrees}C have increased retrotransposon R2 transcript levels, larger nucleolar size, and elevated levels of the known stemness factor phosphorylated Mad, leading to a working model whereby elevated ribosome biogenesis supports increased stemness signaling to promote GSC maintenance in mild cold. These findings suggest potential mechanisms and open new questions for investigation towards a deeper understanding of how temperature modulates gene expression and impacts germline development and quality--which are essential for the perpetuation of species.

developmental biology↗

Dynamic Changes in Endometrial Folding and Secretory Activity Across the Menstrual Cycle

Embryo implantation remains a major limitation of assisted reproductive technology, with failure occurring in approximately 30% of euploid embryo transfers. Implantation requires a synchronized dialogue between the blastocyst and receptive endometrium during the window of implantation (WOI), yet minimally invasive approaches to characterize the structural and molecular features of receptivity remain limited. We analyzed paired sonohysterogram images and uterine lavage samples collected during the proliferative and mid-secretory phases from subjects with regular ovulatory cycles and proven fertility. Endometrial folds were quantified, and lavage samples were analyzed by Luminex multiplex immunoassay. Folds were present in both phases but were significantly more abundant during the mid-secretory WOI, independent of imaging view and endometrial thickness. Folding correlated strongly with circulating estradiol level during the proliferative phase but not the mid-secretory phase, and folding patterns between phases were not correlated, suggesting distinct regulatory mechanisms. Consistent with these structural patterns, uterine lavage demonstrated phase-specific differences in expression of factors associated with endometrial receptivity and implantation, with glandular epithelium, and myeloid-lineage cells emerging as major contributors. Together, these findings identify coordinated structural and secretory processes during the WOI and support further evaluation of endometrial folding and uterine lavage as complementary, minimally invasive markers of endometrial receptivity.

developmental biology↗