Beyond Conventional Models: Recreating the Initiation, Evolution, and Genome of GBM

Bohm, A.; DePetro, J.; Binding, C.; Gerber, A.; Chahley, N.; Ware, M.; Thomas, K.; Bukhari, S.; Chen, C.; Chahley, E.; Grisdale, C.; Berger, N. D.; Lawn, S.; Yu, Y.; Wong, R.; Shen, Y.; Omairi, H.; Mirzaei, R.; Maxwell, L.; Pedersen, H.; Yong, V. W.; Weiss, S.; Chan, J. A.; Cimino, P. J.; Kelly, J.; Jones, S. J. M.; Holland, E.; Blough, M. D.; Cairncross, G.

doi:10.1101/837138

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bioRxiv · 10.1101/837138

Beyond Conventional Models: Recreating the Initiation, Evolution, and Genome of GBM

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Abstract

BackgroundImagining ways to prevent or treat glioblastoma (GBM) have been hindered by a lack of understanding of its pathogenesis. Although PDGF-AA overexpression may be an early event, critical details of the core biology are lacking. Existing PDGF-driven models replicate its microscopic appearance but not the genomic architecture characteristic of the human disease. Here we report a new model of GBM that overcomes this barrier to authenticity. MethodsUsing a method developed to study neural stem cells, we investigated the effects of PDGF-AA on subventricular zone (SVZ) cells, the putative cell of origin of GBM. We micro-dissected SVZ tissue from p53-null and wild-type adult mice, established primary cultures in media supplemented with PDGF-AA, and assessed cell viability, proliferation, genome stability, and tumour forming potential. ResultsCounterintuitive to its canonical role as a growth factor, we observed immediate and massive death of SVZ cells in PDGF-AA. Wild-type cells did not survive in PDGF-AA. However, a small fraction of null cells evaded apoptosis, displayed attenuated proliferation, gradually accumulated whole chromosome gains and losses, and, signalled by sudden rapid proliferation and growth factor independence, became tumorigenic in immune-competent syngeneic mice. Transformed cells had an OPC-like profile, were resistant to PDGFR- inhibition, and harboured highly abnormal karyotypes similar to those seen in human GBMs. ConclusionThis model associates genome instability in SVZ cells with chronic exposure to PDGF-AA; it is the first model to replicate the genomic landscape of GBM and first in which the earliest phases of GBM can be directly observed. IMPORTANCE OF STUDYWe have developed a mouse model in which the initiation, evolution and genomic landscape of GBM can be thoroughly studied thus paving the way for ideas about how this deadly brain cancer might be prevented, interrupted at an occult stage, or treated with very different therapies.

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Bohm, A., DePetro, J., Binding, C., Gerber, A., Chahley, N., Ware, M., Thomas, K., Bukhari, S., Chen, C., Chahley, E., Grisdale, C., Berger, N. D., Lawn, S., Yu, Y., Wong, R., Shen, Y., Omairi, H., Mirzaei, R., Maxwell, L., Pedersen, H., Yong, V. W., Weiss, S., Chan, J. A., Cimino, P. J., Kelly, J., Jones, S. J. M., Holland, E., Blough, M. D., Cairncross, G.. 2019-11-09. Beyond Conventional Models: Recreating the Initiation, Evolution, and Genome of GBM. https://doi.org/10.1101/837138

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