A RETINOBLASTOMA-RELATED transcription factor network governs egg cell differentiation and stress response in Arabidopsis

Kirioukhova-Johnston, O.; Pawar, P.; Govind, G.; Pantha, P.; Lemcke, R.; Nandana, V.; Larsen, D. S.; Rhahul, A. M.; Shah, J. N.; Born, P. v.; Wijesinghege, C.; Zhou, Y.; Gruissem, W.; Turck, F.; Dassanayake, M.; Johnston, A. J.

doi:10.1101/772400

bioRxiv · 10.1101/772400

A RETINOBLASTOMA-RELATED transcription factor network governs egg cell differentiation and stress response in Arabidopsis

Kirioukhova-Johnston, O.·Pawar, P.·Govind, G.·Pantha, P.·Lemcke, R.·Nandana, V.·Larsen, D. S.·Rhahul, A. M.·Shah, J. N.·Born, P. v.·Wijesinghege, C.·Zhou, Y.·Gruissem, W.·Turck, F.·Dassanayake, M.·Johnston, A. J.

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Abstract

The multicellular embryo, and ultimately the entire organism, is a derivative of the fertilized egg cell. Unlike in animals, transcription factor networks orchestrating faithful egg development are still largely unknown in plants. We have identified that egg cell differentiation in Arabidopsis require interplay between evolutionarily conserved onco-protein homologs RETINOBLASTOMA-RELATED (RBR) and redundant MYB proteins MYB64/MYB119. RBR physically interacts with the MYBs; and with plant-specific transcription factors belonging to the RWP-RK-domain (RKD) family and LEAFY COTYLEDON1 (LEC1), which participate in development of egg cells and inherent stress response. RBR binds to most of these egg cell-expressed loci at the DNA level, partially overlapping with sites of histone methylation H3K27me3. Since deregulation of RKDs phenocopies mutants of RBR and the MYBs in terms of cell proliferation in the egg cell spatial domain, all the corresponding proteins are likely required to restrict parthenogenetic cell divisions of the egg cells. Cross-talk among these transcription factors, and direct regulation by RBR, govern egg cell development and expression of egg-to-zygotic polarity factors of the WUSCHEL RELATED HOMEOBOX family. Together, a network of RBR-centric transcription factors underlies egg cell development and stress response, possibly, in combination with several other predicted nodes.\n\nAuthor summaryThe RETINOBLASTOMA protein is one of the core components of the Eukaryotic cell cycle, and corresponding evolutionary homologs have been implicated not only to repress cell division but also to control differentiation and development. How RETINOBLASTOMA RELATED (RBR) associate with other higher order regulators to control faithful egg cell development in sexual plants is pivotal for manipulation of successful reproduction in general, and engineering of parthenogenesis when asexual or apomictic seed progeny are desirable over sexual plants. Using a suite of molecular methods, we show that a RBR-associated transcription factor network operates to specify egg cells in Arabidopsis. Complex cross-regulation within these transcription factors seems to be necessary for successful maternal egg cell to zygotic transition and reproductive stress response. Detailed genetic analysis implicate that RBR and its interactive partners belonging to MYB and RWP-RK transcription factor families are possibly required to prevent parthenogenesis of the sexual egg cells. Novel RBR networks and stress nodes explained in this study might help to improve our understanding of sexual and asexual reproduction.

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Kirioukhova-Johnston, O., Pawar, P., Govind, G., Pantha, P., Lemcke, R., Nandana, V., Larsen, D. S., Rhahul, A. M., Shah, J. N., Born, P. v., Wijesinghege, C., Zhou, Y., Gruissem, W., Turck, F., Dassanayake, M., Johnston, A. J.. 2019-09-18. A RETINOBLASTOMA-RELATED transcription factor network governs egg cell differentiation and stress response in Arabidopsis. https://doi.org/10.1101/772400

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