Ribo-seQC: comprehensive analysis of cytoplasmic and organellar ribosome profiling data

Calviello, L.; Sydow, D.; Harnett, D.; Ohler, U.

doi:10.1101/601468

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bioRxiv · 10.1101/601468

Ribo-seQC: comprehensive analysis of cytoplasmic and organellar ribosome profiling data

Calviello, L.·Sydow, D.·Harnett, D.·Ohler, U.

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Abstract

SummaryRibosome profiling enables genome-wide analysis of translation with unprecedented resolution. We present Ribo-seQC, a versatile tool for the comprehensive analysis of Ribo-seq data, providing in-depth insights on data quality and translational profiles for cytoplasmic and organelle ribosomes. Ribo-seQC automatically generates platform-independent HTML reports, offering a detailed and easy-to-share basis for collaborative Ribo-seq projects.\n\nAvailabilityRibo-seQC is available at https://github.com/ohlerlab/RiboseQC and submitted to Bioconductor.\n\nContactuwe.ohler@mdc-berlin.de

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Calviello, L., Sydow, D., Harnett, D., Ohler, U.. 2019-04-08. Ribo-seQC: comprehensive analysis of cytoplasmic and organellar ribosome profiling data. https://doi.org/10.1101/601468

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