Convolutional Sparse Coded Dynamic Brain Functional Connectivity

Yan, J.; zhu, y.

doi:10.1101/476663

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bioRxiv · 10.1101/476663

Convolutional Sparse Coded Dynamic Brain Functional Connectivity

Yan, J.·zhu, y.

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Abstract

Functional brain network has been widely studied in many previous work for brain disorder diagnosis and brain network analysis. However, most previous work focus on static dynamic brain network research. Lots of recent work reveals that the brain shows dynamic activity even in resting state. Such dynamic brain functional connectivity reveals discriminative patterns for identifying many brain disorders. Current sliding window based dynamic brain connectivity framework are not easy to be applied to real clinical applications due to many issues: First, how to set up the optimal sliding window size and how to determine the threshold for the brain connectivity patterns. Secondly, how to represent the high dimensional dynamic brain connectivity pattern in a low dimensional representations for diagnosis purpose. Last, how to deal with the different length dynamic brain network patterns especially when the raw data are of different length. In order to address all those above issues, we proposed a new framework, which employs multiple scale sliding windows and automatically learns a sparse and low ran dynamic brain functional connectivity patterns from raw fMRI data. Furthermore, we are able to measure different length dynamic brain functional connectivity patterns in an equal space by learning a sparse coded convolutional filters. We have evaluated our method with state of the art dynamic brain network methods and the results demonstrated the strong potential of our methods for brain disorder diagnosis in real clinical applications.

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Yan, J., zhu, y.. 2018-11-27. Convolutional Sparse Coded Dynamic Brain Functional Connectivity. https://doi.org/10.1101/476663

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