Search bioRxiv⌕ Search

bioRxiv · 10.1101/471672

Wolf-Hirschhorn Syndrome-associated genes are enriched in motile neural crest and affect craniofacial development in Xenopus laevis

Abstract

Wolf-Hirschhorn Syndrome (WHS) is a human developmental disorder arising from a hemizygous perturbation, typically a microdeletion, on the short arm of chromosome four. In addition to pronounced intellectual disability, seizures, and delayed growth, WHS presents with a characteristic facial dysmorphism and varying prevalence of microcephaly, micrognathia, cartilage malformation in the ear and nose, and facial asymmetries. These affected craniofacial tissues all derive from a shared embryonic precursor, the cranial neural crest, inviting the hypothesis that one or more WHS-affected genes may be critical regulators of neural crest development or migration. To explore this, we characterized expression of multiple genes within or immediately proximal to defined WHS critical regions, across the span of craniofacial development in the vertebrate model system Xenopus laevis. This subset of genes, WHSC1, WHSC2, LETM1, and TACC3, are diverse in their currently-elucidated cellular functions; yet we find that their expression demonstrates shared tissue-specific enrichment within the anterior neural tube, pharyngeal arches, and later craniofacial structures. We examine the ramifications of this by characterizing craniofacial development and neural crest migration following individual gene depletion. We observe that several WHS-associated genes significantly impact facial patterning, cartilage formation, pharyngeal arch migration, and neural crest motility, and can separately contribute to forebrain scaling. Thus, we have determined that numerous genes within and surrounding the defined WHS critical regions potently impact craniofacial patterning, suggesting their role in WHS presentation may stem from essential functions during neural crest-derived tissue formation.\n\nAuthor SummaryWolf-Hirschhorn Syndrome (WHS), a developmental disorder caused by small deletions on chromosome four, manifests with pronounced and characteristic facial malformation. While genetic profiling and case studies provide insights into how broader regions of the genome affect the syndromes severity, we lack a key component of understanding its pathology; a basic knowledge of how individual WHS-affected genes function during development. Importantly, many tissues affected by WHS derive from shared embryonic origin, the cranial neural crest. This led us to hypothesize that genes deleted in WHS may hold especially critical roles in this tissue. To this end, we investigated the roles of four WHS-associated genes during neural crest cell migration and facial patterning. We show that during normal development, expression of these genes is enriched in migratory neural crest and craniofacial structures. Subsequently, we examine their functional roles during facial patterning, cartilage formation, and forebrain development, and find that their depletion recapitulates features of WHS craniofacial malformation. Additionally, two of these genes directly affect neural crest cell migration rate. We report that depletion of WHS-associated genes is a potent effector of neural crest-derived tissues, and suggest that this explains why WHS clinical presentation shares so many characteristics with classic neurochristopathies.

Source connections

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Mills, A., Bearce, E., Cella, R., Kim, S. W., Selig, M., Lee, S., Lowery, L. A.. 2018-11-15. Wolf-Hirschhorn Syndrome-associated genes are enriched in motile neural crest and affect craniofacial development in Xenopus laevis. https://doi.org/10.1101/471672

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

Compartment-Resolved Matrisome Shifts During Postnatal Tendon Maturation in Mice

Tendons acquire their load-bearing capacity during the first month of postnatal growth, driven by the extensive remodeling of the extracellular matrix (ECM). While the role of specific individual components to this process have been well characterized, a comprehensive assessment of how the tendon matrisome changes during this critical window is lacking. This, in part, is due to the challenges associated with solubilization of mature ECM, which is underrepresented by conventical proteomic approaches. To address this, we performed compartment-resolved proteomics on murine Achilles and plantaris tendons at postnatal days 0 (P0), P14, and P28. Sequential extraction methods leveraged a CHAPS-soluble fraction, capturing cellular and soluble matrisome proteins, from the insoluble mature ECM fraction, solubilized by guanidine hydrochloride and hydroxylamine hydrochloride and separately analyzed by label-free quantitative LC-MS/MS. Analysis shows that the two compartments followed distinct trajectories during maturation. The insoluble matrix was dominated by collagenous proteins, which increased from 95% to over 99% of the identified signal intensity, and its composition was largely established by P14. Within the soluble matrisome compartment, collagens increased from 50% to over 60% by P14, accompanied by dynamic regulation of proteins implicated in collagen processing (P4HA1, PCOLCE), crosslinking (LOX, LOXL2), and regulators of collagen fibril assembly and growth (DCN, BGN, FMOD, THBS3, THBS4). Beyond these established regulators, we observed dynamic regulation of less-characterized fibril-associated proteoglycans (KERA, OGN, CHAD), matricellular (COMP, POSTN, MATN2), and angiogenic regulatorily proteins (SERPINF1, ECM1). Together, this work establishes a comprehensive protein-level reference for postnatal tendon maturating, provides new insights into the molecular regulation of functional tendon development.

developmental biology↗

Ferroptosis of selective progenitor cell types during embryogenesis ensures proper organ morphogenesis

Ferroptosis, a form of non-apoptotic cell death, is induced by lipid peroxidation resulting from an intracellular accumulation of labile iron (1). While apoptosis is involved in embryonic development (2), the role of ferroptosis in embryogenesis is unknown. Here, we report that the ferroptosis process occurs in the embryonic lung and kidney at mid- and late-gestation. In these tissues, pro-ferroptotic cells include subpopulations of the Sox9+ distal lung epithelial cells and the Flk1+ vascular progenitors in the kidney glomeruli. Lipidomic analysis reveals mixed lipid peroxidation as the driver for ferroptosis. The role of ferroptosis in the morphogenesis of these organs was confirmed by triple positivity of TfR1, 4-HNE and TUNEL, mitochondrial defects, cell membrane breakage, dead cell remnants, single-cell RNA-sequencing of a ferroptosis gene signature. Genetic manipulation of Gpx4, an endogenous inhibitor of ferroptosis. Further, genetic knockout or transgenic overexpression of Gpx4 affects lung and kidney development and results in cystic lungs and kidneys. Notably, conditional deletion Gpx4 results in hypoplasia of the lung epithelia and of the renal glomeruli, while transgenic overexpression of Gpx4 resulted in atelectasis with collapsed lung alveoli and hypertrophic glomeruli. Together, these findings show that ferroptosis regulates lung and kidney morphogenesis by acting in key progenitor cell populations during gestation. Supplementation of iron or polyunsaturated fatty acid during pregnancy has implications for organogenesis.

developmental biology↗

Variation in the embryonic cell lineages of Caenorhabditis elegans natural populations

Developmental variation has often been appreciated as a major phenotypic substrate of evolutionary innovation in multicellular organisms. Although quantification of developmental variation in isogenic populations has a long history, it has been difficult to accomplish across natural populations until recently. Given its invariant cell lineage, Caenorhabditis elegans represents an ideal model system for studying how natural diversity in development is expressed at the resolution of single cells, cell lineages, and the whole embryo. Using embGAN, a deep-learning pipeline that enables label-free lineage tracing without the bottleneck and potential confounding effects of generating transgenic strains, we reconstructed the early embryonic lineage of 78 embryos spanning eight genetic backgrounds, including six wild strains, and quantified cell-cycle timing with a lineage-aligned graph metric that separates global rescaling of developmental rate from localized changes in lineage structure. We found that cell-cycle timing differs reproducibly among genotypes, with between-strain variation consistently exceeding within-strain variation. The magnitude of this variation was itself genotype-specific and not correlated with levels of genetic divergence. Unlike the global shifts in the tempo of development that dominate divergence between species, these differences are predominantly in lineage patterning, changing the timing of specific divisions, and they align to cell fate. Thus, the invariant lineage of C. elegans is built on a structured, genotype-specific landscape of developmental variation, a potential source of trait variation from which drift in developmental systems can emerge.

developmental biology↗