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bioRxiv · 10.1101/367086

SP1433-1438 operon of Streptococcuspneumoniae regulates metal homeostasis and cellular metabolism during zinc-stress

Burcham, L. R.·Hill, R. A.·Caulkins, R. C.·Emerson, J. P.·Nanduri, B.·Rosch, J. W.·Fitzkee, N. C.·Thornton, J. A.
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Abstract

Streptococcus pneumoniae colonizes the mucosa of the human nasopharynx and is a leading cause of community-acquired pneumonia, acute otitis media, and bacterial meningitis. Metal ion homeostasis is vital to the survival of this pathogen and contributes significantly to both colonization and invasive disease. Microarray and qRT-PCR analysis revealed an upregulation of an uncharacterized operon (SP1433-1438) in pneumococci subjected to metal-chelation by N,N,N,N-tetrakis-(2-Pyridylmethyl)ethylenediamine (TPEN). Supplementation of either zinc or cobalt following TPEN treatment drastically abrogated induction. BLAST analysis predicted this operon to encode two ABC-transporters, sharing homology to a multidrug resistance system (SP1434-1435) and an energy-coupling factor (ECF) transport system (SP1436-1438). Inductively coupled plasma mass spectrometry (ICP-MS) analysis indicated changes in intracellular concentrations of iron, zinc, and manganese ions in a {Delta}1434-8 strain compared to parental T4R. Analysis of the secreted metabolomic profile of the T4R and {Delta}1434-8 strains identified significant changes in pneumococcal glycolytic pathways, indicating a shift towards increased production of acetate. Additionally, proteomic analysis revealed 41 differentially expressed proteins in the {Delta}1434-8 strain, with roughly 20% of them regulated by the global catabolite repressor, CcpA. Based on these findings, we propose that the SP1433-1438 operon is largely involved in the central metabolism of S. pneumoniae during zinc-limitation.\n\nImportanceMetal sequestration is a common strategy utilized by the host immune response as well as antibiotics such as vancomycin to kill invading bacterial pathogens (1). However, pneumococcus is still able to thrive under zinc-limiting conditions. This study describes a previously uncharacterized operon encoding two ABC transport systems that are strongly induced during zinc-limiting conditions. This operon was found to be regulated by a zinc-dependent regulator (SP1433) that functions independently of the overarching AdcR regulon. We have additionally utilized a 2D-NMR approach to analyze the secreted metabolome and have employed proteomic analysis to identify a role for these systems in the maintenance of cellular metabolism. This study provides new information on how Streptococcus pneumoniae responds and adapts to zinc-limiting conditions.

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Burcham, L. R., Hill, R. A., Caulkins, R. C., Emerson, J. P., Nanduri, B., Rosch, J. W., Fitzkee, N. C., Thornton, J. A.. 2018-07-11. SP1433-1438 operon of Streptococcuspneumoniae regulates metal homeostasis and cellular metabolism during zinc-stress. https://doi.org/10.1101/367086

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