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bioRxiv · 10.1101/237180

NanoPack: visualizing and processing long read sequencing data

De Coster, W.·D'Hert, S.·Schultz, D. T.·Cruts, M.·Van Broeckhoven, C.
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Abstract

Summary: Here we describe NanoPack, a set of tools developed for visualization and processing of long read sequencing data from Oxford Nanopore Technologies and Pacific Biosciences.\n\nAvailability and Implementation: The NanoPack tools are written in Python3 and released under the GNU GPL3.0 Licence. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 subsystem for linux and are available as a graphical user interface, a web service at http://nanoplot.bioinf.be and command line tools.\n\nContact: wouter.decoster@molgen.vib-ua.be\n\nSupplementary information: Supplementary tables and figures are available at Bioinformatics online.

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De Coster, W., D'Hert, S., Schultz, D. T., Cruts, M., Van Broeckhoven, C.. 2017-12-21. NanoPack: visualizing and processing long read sequencing data. https://doi.org/10.1101/237180

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