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bioRxiv · 10.1101/2025.11.18.689160

PLANT MICROTECHNIQUE WITH RESIN - TOWARDS PLANT HISTOLOMICS

Cerritos-Castro, I. T.·Patron-Soberano, O. A.·Barba de la Rosa, A. P.
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Abstract

Plant microtechnique is a sequence of skill-intensive histological and microscopy procedures that often yield limited quantitative information. However, it provides the cellular context needed to uncover biomolecular functions. In this work, we developed an easier microtechnique and a novel histolomic approach for the quantitative analysis of histological features. We replaced paraffin with resin as the embedding medium, developed an adhesive treatment for glass slides, and developed a trichrome staining. These improvements provided superior tissue stability and greatly facilitated the skill-dependent steps. Unlike current stainings, our trichrome staining produced a broader color palette and sharply contrasted numerous organelles and ultrastructures in light microscopy. We leveraged these microtechnique advances through image segmentation and quantitative analysis in MATLAB and Adobe Photoshop to measure a wide range of morphometric and compositional features, thereby generating the histolome. To validate this workflow, we applied it comprehensively and systematically to several model plants and calculated their C4 Kranz-anatomy level using a combination of characteristic histological features. The histolomes provided new insights into cellular functions and quantitative anatomical differentiation among species. The resin-based microtechnique and histolomic approach will help facilitate, standardize, and make plant histology research quantitative. GRAPHICAL ABSTRACT O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=87 SRC="FIGDIR/small/689160v2_ufig1.gif" ALT="Figure 1"> View larger version (41K): org.highwire.dtl.DTLVardef@5a7098org.highwire.dtl.DTLVardef@1963fa7org.highwire.dtl.DTLVardef@12d0b81org.highwire.dtl.DTLVardef@4e44ce_HPS_FORMAT_FIGEXP M_FIG C_FIG

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Cerritos-Castro, I. T., Patron-Soberano, O. A., Barba de la Rosa, A. P.. 2025-11-19. PLANT MICROTECHNIQUE WITH RESIN - TOWARDS PLANT HISTOLOMICS. https://doi.org/10.1101/2025.11.18.689160

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