Search bioRxiv⌕ Search

bioRxiv · 10.1101/2025.10.06.680744

The Initial Detection of a Diversity of Viruses Associated with Ladybirds and Other Biocontrol Agents Prompts Interesting Ecological Insights

Abstract

Predatory insects such as ladybirds, green lacewings, and an aphid-feeding gall midge have been commercialized and deployed worldwide to deal with the challenge of pest control. However, no information is available on their viruses which could interfere with the efficiency of biocontrol. To start filling this gap, this study employed an integrative bioinformatics approach starting from 21 publicly available RNA-seq libraries from 6 countries of 8 natural enemy species used to control aphids. A total of 41 putative novel viruses were identified and classified into 16 families and 1 genus. In addition, 13 known viruses were detected, including aphid and phytopathogenic viruses, and a virus from the invasive harlequin ladybird. The Aphid lethal paralysis virus was detected in several species at different trophic levels, including plants, aphid vectors, predatory insects, and insectivorous vertebrates. Thus, an ecosystem perspective on viruses across trophic levels is proposed because feeding may facilitate the spread of viruses between distant taxonomic species, such as invertebrate and vertebrate insectivorous predators. In conclusion, a simple assessment of the viral diversity in eight predatory insects of agricultural relevance, using a bioinformatics approach, has revealed a potential interspecies viral flux that deserves research attention. Further studies on viruses circulating in agricultural insect species are essential to improve biological control strategies based on trophic interactions, to conserve biodiversity, and to develop knowledge on the evolution of viral entities and their role as members of an agroecological system.

Source connections

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Caldas-Garcia, G. B., Lopes, I. S., Aguiar, E. R. G. R.. 2025-10-06. The Initial Detection of a Diversity of Viruses Associated with Ladybirds and Other Biocontrol Agents Prompts Interesting Ecological Insights. https://doi.org/10.1101/2025.10.06.680744

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

A population-scale landscape of the subgingival microbiome reveals divergent routes to periodontal dysbiosis

Periodontitis is an archetypical mucosal inflammatory disease in which microbiome dysbiosis at the tooth-epithelial interface interacts with host genetic and behavioral risk factors to drive immune-mediated tissue destruction. Although subgingival microbiome compositional shifts are thought to parallel disease severity, microbiome variation at the population-level and its relationship to periodontal clinical phenotypes and disease-modifying factors remain poorly defined. Here, we use unsupervised manifold learning to map the compositional landscape of the subgingival microbiome in 1,355 adults spanning periodontal health to severe periodontitis. We identified eight latent microbiome states organized along a branching continuum from eubiosis to dysbiosis. An intermediate microbial configuration marked ecological destabilization and bifurcation into two distinct periodontitis-associated dysbiotic trajectories, distinguished by links to gingival inflammation and smoking. Although the microbiome trajectories broadly tracked periodontal destruction, a minority of individuals showed discordant microbiome-clinical phenotypes, with some individuals with periodontitis retaining otherwise eubiotic microbiomes enriched for low-abundance pathobionts, while some cases of health or mild disease had highly dysbiotic communities, suggesting distinct host susceptibility. Together, these findings define a population-scale ecological landscape of the subgingival microbiome, reveal divergent trajectories to periodontal dysbiosis, and highlight heterogeneity in the relationship between microbial community structure and clinical disease expression.

microbiology↗

The iron-binding siderophore enterobactin is required for the response of multi-drug resistant Klebsiella pneumoniae to zinc limitation

To persist during infection Klebsiella pneumoniae must overcome nutrient iron and zinc limitation imposed by the host immune system through a process called nutritional immunity. Secreted small molecule siderophores are a major virulence determinant of Klebsiella pneumoniae pathogenesis and are presumed to overcome nutritional immunity by binding iron for bacterial acquisition. In this work, we set out to identify how a multi-drug resistant K. pneumoniae grows in zinc limited environments. Using unbiased transcriptomics, proteomics, and an arrayed transposon screen, we identified that synthesis and uptake of the siderophore enterobactin is required to allow for growth in low zinc conditions. Iron-specific chelators did not replicate this phenotype and addition of supplemental iron through heme in growth media could not complement severe growth defects of enterobactin mutant K. pneumoniae experiencing zinc limitation. Finally, zinc starvation induced enterobactin production independent of the canonical zinc uptake regulator (Zur) transcription factor suggesting an unidentified regulatory mechanism by which Gram-negative pathogens may respond to zinc stress. Together, these studies expand the role of enterobactin beyond iron regulation and highlight a previously unreported link between iron and zinc homeostasis in Klebsiella pneumoniae.

microbiology↗

A microbiota-derived protease links phage susceptibility to host epithelial responses

Bacteriophages are major ecological drivers of gut microbial ecology, yet whether bacterial mechanisms that determine phage susceptibility have consequences for the mammalian host remains poorly understood. Here, we identify dipeptidyl peptidase 11 (Dpp11a), the predominant active serine protease of the prevalent gut commensal Phocaeicola vulgatus, as an unexpected bacterial defence factor. Dpp11a protects against environmental proteases and confers resistance to bacteriophage infection. Metatranscriptomic analyses further reveal increased expression of both dpp11a and P. vulgatus-associated phage transcripts in ulcerative colitis stool samples, indicating that both components of this interaction are transcriptionally active in disease-associated human microbiomes. Using the microfluidic gut-on-a-chip co-culture model HuMiX, we show that the absence of Dpp11 is accompanied by altered epithelial tight-junction remodelling during phage-bacterial infection. Together, our findings reveal that the consequences of bacterial phage defence can extend beyond phage-bacterium interactions to the mammalian epithelium.

microbiology↗