AAV-mediated allele-specific silencing alleviates neuropathology in a novel non-human primate model of Spinocerebellar ataxia type 3

Henriques, C.; Lobo, D. D.; Silva, A. C.; Fernandes, A. R.; Lopes, M. M.; Fayard, A.; Jan, C.; Lecourtois, S.; Guillermier, M.; Flament, J.; Castelhano, J.; Castelo-Branco, M.; Oliveira, R. C.; Hantraye, P.; Yalamanchili, P.; De Marco, S.; Aron Badin, R.; Pereira de Almeida, L.; Nobre, R. J.

doi:10.1101/2025.10.02.680027

bioRxiv · 10.1101/2025.10.02.680027

AAV-mediated allele-specific silencing alleviates neuropathology in a novel non-human primate model of Spinocerebellar ataxia type 3

Henriques, C.·Lobo, D. D.·Silva, A. C.·Fernandes, A. R.·Lopes, M. M.·Fayard, A.·Jan, C.·Lecourtois, S.·Guillermier, M.·Flament, J.·Castelhano, J.·Castelo-Branco, M.·Oliveira, R. C.·Hantraye, P.·Yalamanchili, P.·De Marco, S.·Aron Badin, R.·Pereira de Almeida, L.·Nobre, R. J.

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Abstract

Spinocerebellar ataxia type 3 (SCA3), also known as Machado-Joseph disease (MJD), is an autosomal dominant neurodegenerative disorder caused by an abnormal expansion of the cytosine-adenine-guanine (CAG) repeats in the ATXN3 gene. This mutation results in the production of an Ataxin-3 protein with an extended polyglutamine sequence, contributing to the diseases neuropathology. Currently, no treatment is available that can slow or halt the progression of SCA3. Gene-targeted therapies have gained significant attention for their potential to address the root cause of SCA3. Preliminary studies in transgenic mice using adeno-associated viral vector serotype 9 (AAV9) encoding artificial microRNAs targeting the mutant ATXN3 allele (AAV9-miR-ATXN3) have shown promising results. However, to advance this therapeutic approach toward clinical application, further studies in an animal model that more closely resembles human biology are essential. In this exploratory study, we assessed the biodistribution and target engagement of AAV9-miR-ATXN3 delivered via intracisterna magna (ICM) injection in non-human primates (NHPs). Using a lentiviral vector (LV) to introduce a mutant Ataxin-3 cDNA with 72 glutamines (LV-mutATXN3-Q72) into the NHP cerebellum, we successfully overexpressed SCA3 in the NHP brain. SCA3 NHP exhibited Ataxin-3 aggregation in the cerebellum, recruitment of inflammatory cells and reduced cerebellar volume. ICM administration of AAV9-miR-ATXN3 effectively directed transgene expression to key brain regions impacted by SCA3 pathology and enabled specific, dose-dependent silencing of mutant Ataxin-3. Furthermore, the therapeutic dose prevented the cerebellar morphological and biochemical alterations induced by the overexpression of mutant ATXN3. These proof-of-concept experiments are crucial, not only for advancing AAV9-miR-ATXN3 toward clinical use but also for establishing a valuable platform for validating future therapeutic interventions.

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Henriques, C., Lobo, D. D., Silva, A. C., Fernandes, A. R., Lopes, M. M., Fayard, A., Jan, C., Lecourtois, S., Guillermier, M., Flament, J., Castelhano, J., Castelo-Branco, M., Oliveira, R. C., Hantraye, P., Yalamanchili, P., De Marco, S., Aron Badin, R., Pereira de Almeida, L., Nobre, R. J.. 2025-10-02. AAV-mediated allele-specific silencing alleviates neuropathology in a novel non-human primate model of Spinocerebellar ataxia type 3. https://doi.org/10.1101/2025.10.02.680027

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