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bioRxiv · 10.1101/2025.08.01.668081

The gut microbiota-derived metabolite indole regulates cytoskeletal functions and virulence in Entamoeba histolytica

Abstract

Entamoeba histolytica is a pathogenic amoeba that inhabits the human large intestine and causes amoebiasis. E. histolytica interacts with both the intestinal microbiota and the metabolites they produce. These bacterial metabolites play a crucial role in shaping the virulence and stress resistance of E. histolytica. One such metabolite, indole, is synthesized by bacteria from tryptophan and functions as a key signaling molecule. In this study, we investigated the impact of indole on E. histolytica by incubating trophozoites with the metabolite and performing proteomic analyses under various conditions, including trophozoites adapted to indole. Our results show that indole is toxic to E. histolytica, with an inhibitory concentration (IC) of 1.2 mM; however, the parasite can adapt to this concentration. Proteomic analyses reveal that indole-adapted trophozoites display enhanced resistance to oxidative stress (OS), upregulation of cytoskeletal proteins, and increased virulence. These trophozoites exhibit increased F-actin formation, smaller cell size, stronger adhesion to HeLa cells, enhanced migratory capacity, and more effective colonization of the mouse cecum compared to non-adapted trophozoites. Thus, indole exerts a dual effect on E. histolytica physiology. While indole is initially toxic to the parasite, adaptation to indole confers enhanced resistance to OS and promotes a more virulent phenotype. This duality underscores the complex role of microbiota-derived metabolites in modulating parasite behavior and highlights indole as a key microbial signal. Author summaryEntamoeba histolytica is a unicellular parasite living in the human large intestine and can cause a disease called amoebiasis. Inside the intestine, E. histolytica interacts with the microbiota and with the metabolites they produce. One such metabolite is indole, which is produced by gut bacteria from tryptophan and used by human cells and trophozoites. In this study, we explored how indole affects E. histolytica. We found that indole is toxic to the parasite at first, but over time, the amoeba can adapt and survive in its presence. Using protein analysis techniques, we discovered that indole-adapted amoebas become more resistant to stress and more virulent. They produce more F-actin, leading to improved mobility, degrade more HeLa cells, and colonize the gut of mice more efficiently than wild-type amoebas (WT). These results show that, while indole initially harms the parasite, it also triggers changes that make it more resistant to stress and more virulent. Our work highlights how metabolites produced by bacteria in the large intestine can influence the behavior of E. histolytica.

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BibTeXRIS

Zanditenas, E., Geffen, M. T., Saito-Nakano, Y., Kobayashi, S., Hisaeda, H., Nozaki, T., Guo, Y., Mahapatra, S., Wolfenson, H., Ankri, S.. 2025-08-01. The gut microbiota-derived metabolite indole regulates cytoskeletal functions and virulence in Entamoeba histolytica. https://doi.org/10.1101/2025.08.01.668081

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