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bioRxiv · 10.1101/2025.06.14.659565

Targeted Inhibition of Translation Initiation via 2'O-Methylation of Start Codons

Patrasso, E. A.·Serio, H.·Suh, A.·Mou, S.·Vasquez, K.·Wu, S.·Yi, Y.·Arango, D.
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Abstract

Translation initiation involves a concerted set of intermolecular interactions that efficiently recognize optimal AUG start codons. However, translation initiation complexes often start at upstream non-optimal AUGs or near-cognate codons, leading to the expression of upstream Open Reading Frames (uORFs). Using retrospective analyses of translation preinitiation cryo-EM structures, we identified putative hydrogen bonds between the 2-OH groups of mRNA start codons with 18S rRNA. Disruption of these interactions using a chemical modification of mRNA, 2-O-methylation (Nm), repressed translation initiation by preventing the preinitiation complex from recognizing start codons. Notably, 2-O-methylation in upstream AUG and near-cognate codons inhibits upstream translation initiation while enhancing the expression of canonical ORFs. These findings revealed a transcript- and site-specific inhibitory role for 2-O-methylation in translation initiation, providing novel insights into the mechanisms of start codon selection in human transcriptomes.

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Patrasso, E. A., Serio, H., Suh, A., Mou, S., Vasquez, K., Wu, S., Yi, Y., Arango, D.. 2025-06-17. Targeted Inhibition of Translation Initiation via 2'O-Methylation of Start Codons. https://doi.org/10.1101/2025.06.14.659565

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