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bioRxiv · 10.1101/2025.06.07.658463

Electroporation-Based Gene Delivery and Whole-Organoid Imaging in Human Retinal Organoids

Flohr, K.·Janecek, M.·Wang, L.·Valle, V.·Pi, S.·Peixoto, R.·da Silva, S.
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Abstract

Human retinal organoids (hRetOrg) derived from human induced pluripotent stem cells (hiPSCs) have emerged as powerful in vitro systems for studying retinal development, modeling retinal diseases, and evaluating therapeutic strategies. However, current genetic manipulation approaches, such as stable hiPSC line generation and viral transduction, are laborious, costly, and inefficient, with limited spatial specificity and high variability. Here, we report a rapid, scalable, and spatially precise electroporation-based platform for efficient plasmid-based gene delivery in early-stage hRetOrg. This method enables tunable and region-specific transfection of retinal progenitor cells without viral vectors or clonal selection. Coupled with resonant-scanning two-photon microscopy, this approach allows fast live cell imaging of whole organoids with subcellular resolution. This versatile system supports high-throughput genetic manipulation and imaging in intact hRetOrg, advancing studies of human retinal development, gene function, and disease. MotivationhRetOrgs offer an unprecedented platform for functional genetic studies of human retinal development and disease. However, existing methods for gene manipulation in hRetOrg are limited by low throughput, inefficiency, and lack of scalability, hindering systematic analysis of gene function and regulatory elements. To address these limitations, we developed a streamlined, high-efficiency pipeline that enables spatially targeted electroporation of hRetOrg during early retinogenesis, combined with fast, high-resolution imaging of whole organoids using two-photon microscopy, allowing studies at both tissue and subcellular scales.

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Flohr, K., Janecek, M., Wang, L., Valle, V., Pi, S., Peixoto, R., da Silva, S.. 2025-06-11. Electroporation-Based Gene Delivery and Whole-Organoid Imaging in Human Retinal Organoids. https://doi.org/10.1101/2025.06.07.658463

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