Impact of Soil Salinity on Microbial Community Composition in Coastal Agricultural lands of Bangladesh: A Metagenomic Approach

Das, S.; Nayem, M. R.; Hira, K. N.; Shermin, R.; Hosen, M. R.; Hossain, M. A.; Tariquzzaman, M.; Biswas, R.; Rahman, F. A.; Saha, M. K.; Rabbi, M. F. A.

doi:10.1101/2025.02.08.637242

bioRxiv · 10.1101/2025.02.08.637242

Impact of Soil Salinity on Microbial Community Composition in Coastal Agricultural lands of Bangladesh: A Metagenomic Approach

Das, S.·Nayem, M. R.·Hira, K. N.·Shermin, R.·Hosen, M. R.·Hossain, M. A.·Tariquzzaman, M.·Biswas, R.·Rahman, F. A.·Saha, M. K.·Rabbi, M. F. A.

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Abstract

A significant obstacle to agricultural productivity is soil salinity, especially in coastal areas where the problem is made worse by climate change and rising sea levels. This study investigates the impact of salinity on microbial community structure and function in agricultural soils from Kuakata, Bangladesh, using 16S rRNA metagenomic sequencing technique. Both saline (EC > 4 dS/m) and non-saline (EC < 1.5 dS/m) areas had soil samples taken; saline soils showed symptoms of crop stress, such as yellowing and blackish discoloration. In comparison to their non-saline counterparts, our investigation showed that saline soils had much reduced microbial diversity and different community compositions. Both soil types were dominated by Proteobacteria and Chloroflexi, while saline soils displayed an enrichment of anaerobic texa (e.g., Desulfobacterota, Pseudomonas) and sulfate-reducing bacteria (e.g., Desulfobacterota, Deferrisomatota). Interestingly, saline soils had a much larger percentage of anaerobic microorganisms (36.4%) than non-saline soils (29.3%) which might results in enhanced denitrification, sulphate reduction, and hydrogen sulphide buildup. These processes disrupt nutrient cycling, lower organic matter decomposition and create toxic conditions for plant growth, ultimately contributing to crop failure. This study provides an insight into the distinct microbial composition in saline and non-saline samples, which can assist in understanding the role of microbial populations in agriculture in saline environments.

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Das, S., Nayem, M. R., Hira, K. N., Shermin, R., Hosen, M. R., Hossain, M. A., Tariquzzaman, M., Biswas, R., Rahman, F. A., Saha, M. K., Rabbi, M. F. A.. 2025-02-08. Impact of Soil Salinity on Microbial Community Composition in Coastal Agricultural lands of Bangladesh: A Metagenomic Approach. https://doi.org/10.1101/2025.02.08.637242

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