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bioRxiv · 10.1101/2024.11.23.624680

Versatile Stain Transfer in Histopathology Using a Unified Diffusion Framework

Yan, X.·Yuan, M.·Lu, Y.·Zhang, Y.·Chen, Z.·Bao, P.·Li, Z.·Dong, B.·Yang, L.·Zhang, L.·Zhou, F.
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Abstract

Histological staining is vital in clinical pathology for visualizing tissue structures. However, these techniques are laborious and time-consuming. Digital virtual staining offers a promising solution, but existing methods typically rely on Generative Adversarial Networks (GANs), which may suffer from artifacts and mode collapse. Motivated by the success of diffusion models, we present DUST, a novel Diffusion-based Unified framework for versatile Stain Transfer in histopathology. To enhance domain awareness and task-specific performance, we propose a dual encoding strategy that integrates the stain types of both the source and target domains. Additionally, we introduce a dynamic dual-output head to address the unstable intensity issue encountered with conventional DDPM implementations. Validated on a curated fourstain kidney histopathological dataset (H&E, MT, PAS, and PASM), DUST demonstrates superior versatile stain transfer capabilities. Our research highlights the potential of diffusion models to advance virtual staining, paving the way for more efficient digital pathology analyses.

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Yan, X., Yuan, M., Lu, Y., Zhang, Y., Chen, Z., Bao, P., Li, Z., Dong, B., Yang, L., Zhang, L., Zhou, F.. 2024-11-23. Versatile Stain Transfer in Histopathology Using a Unified Diffusion Framework. https://doi.org/10.1101/2024.11.23.624680

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