MED26-enriched condensates drive erythropoiesis through modulating transcription pausing

Zhu, S.; Zhang, X.; Li, N.; Zhao, X.; Li, M.; Xie, S.; Yue, Q.; Li, Y.; Li, D.; Wu, F.; Zhang, Z.; Feng, Z.; Zhang, Y.; Choi, W.; Jia, X.; Deng, Y.; Hu, Q.; Yao, X.; Gao, X.; Lee, H.-Y. S.

doi:10.1101/2024.08.26.609654

bioRxiv · 10.1101/2024.08.26.609654

MED26-enriched condensates drive erythropoiesis through modulating transcription pausing

Zhu, S.·Zhang, X.·Li, N.·Zhao, X.·Li, M.·Xie, S.·Yue, Q.·Li, Y.·Li, D.·Wu, F.·Zhang, Z.·Feng, Z.·Zhang, Y.·Choi, W.·Jia, X.·Deng, Y.·Hu, Q.·Yao, X.·Gao, X.·Lee, H.-Y. S.

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Abstract

The Mediator complex regulates various aspects of hematopoietic development, but whether composition of the Mediator complex undergoes dynamic changes for diversifying transcription and functional outputs is unknown. Here, we found that MED26, a subunit in the core Mediator complex, played a distinctive role in facilitating transcription pausing essential for erythroid development. While most Mediator subunits drastically decreased during this process, MED26 remained relatively abundant. Intriguingly, in the early stages, more than half of MED26 occupancy sites did not co-localize with MED1, a representative Mediator subunit, suggesting these subunits exert context-dependent gene regulation. We revealed that MED26-enriched loci were associated with RNA polymerase pausing. MED26 manifested a markedly preferential recruitment of pausing-related factors, leading to an increase in Pol pausing critical for genome-wide transcription repression during erythropoiesis. Moreover, MED26 exhibited pronounced condensate-forming capability, which was necessary for its function in promoting erythropoiesis and recruiting pausing-related factors. Collectively, this study provides mechanistic insights into the functional coordination of distinct Mediator subunits during development and highlights the switch of transcription condensates towards a MED26 enriched form, which modulates transcription pausing to facilitate transcription repression and erythroid development.

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Zhu, S., Zhang, X., Li, N., Zhao, X., Li, M., Xie, S., Yue, Q., Li, Y., Li, D., Wu, F., Zhang, Z., Feng, Z., Zhang, Y., Choi, W., Jia, X., Deng, Y., Hu, Q., Yao, X., Gao, X., Lee, H.-Y. S.. 2024-08-26. MED26-enriched condensates drive erythropoiesis through modulating transcription pausing. https://doi.org/10.1101/2024.08.26.609654

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