Search bioRxiv⌕ Search

bioRxiv · 10.1101/2024.07.31.605896

Isolation and characterization of cell wall and extracellular polysaccharides from cultures of the mycoparasitic strain Tirochoderma koningiopsis

Abstract

The Trichoderma koningiopsis strain showed an extracellular polymers (EPS) synthesis capacity of 1.17 g/L in an optimised Czapek-Dox medium containing sucrose (30 g/L) and yeast extract (7.5 g/L). Three fractions of wall polymers were extracted from the biomass obtained after culture: cold water soluble (WPSZ), hot water soluble (WPSC) and alkali soluble (WPSNaOH), which accounted for 13.3%, 1.8% and 20.2% of the mycelial dry weight, respectively. Structural analyses indicated that the EPS obtained was mannan, and the WPS fractions were glucans containing predominantly [->]4)-Glc-(1[->] linked residues, with branching at [->]3,6)- as well as [->]4,6)-positions. FT-IR and FT-Raman analyses showed that -bonds dominate in the WPSZ and WPSC fractions, whereas {beta}-bonds dominate in the EPS and WPSNaOH fractions. The obtained polymer fractions (PS) showed antioxidant properties in the ABTS, DPPH and FRAP methods and the ability to bind bisphenol A from an aqueous environment. The most important property of the obtained PSs is their ability to reduce germination and inhibit the growth of mycelia of the phytopathogenic Fusarium culmorum strain. The obtained polymers exhibit a number of bioactive properties and can be used in various areas of human life. HighlightsO_LITrichoderma koningiopsis has the ability to synthesise EPS C_LIO_LIEPS are mainly composed of mannose and WPS of glucose C_LIO_LIPS have the ability to chelate BPA and have antioxidant properties C_LIO_LIThe PS obtained has inhibitory properties against F. culmorum. C_LI Graphical Abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=151 SRC="FIGDIR/small/605896v1_ufig1.gif" ALT="Figure 1"> View larger version (46K): org.highwire.dtl.DTLVardef@aaf140org.highwire.dtl.DTLVardef@c4c0e4org.highwire.dtl.DTLVardef@153de0eorg.highwire.dtl.DTLVardef@117a135_HPS_FORMAT_FIGEXP M_FIG C_FIG

Source connections

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Nowak, A., Wlizło, K., Komaniecka, I., Szymanska-Chargot, M., Zdunek, A., Kapral-Piotrowska, J., Tyskiewicz, K., Jaroszuk-Sciseł, J.. 2024-07-31. Isolation and characterization of cell wall and extracellular polysaccharides from cultures of the mycoparasitic strain Tirochoderma koningiopsis. https://doi.org/10.1101/2024.07.31.605896

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

A population-scale landscape of the subgingival microbiome reveals divergent routes to periodontal dysbiosis

Periodontitis is an archetypical mucosal inflammatory disease in which microbiome dysbiosis at the tooth-epithelial interface interacts with host genetic and behavioral risk factors to drive immune-mediated tissue destruction. Although subgingival microbiome compositional shifts are thought to parallel disease severity, microbiome variation at the population-level and its relationship to periodontal clinical phenotypes and disease-modifying factors remain poorly defined. Here, we use unsupervised manifold learning to map the compositional landscape of the subgingival microbiome in 1,355 adults spanning periodontal health to severe periodontitis. We identified eight latent microbiome states organized along a branching continuum from eubiosis to dysbiosis. An intermediate microbial configuration marked ecological destabilization and bifurcation into two distinct periodontitis-associated dysbiotic trajectories, distinguished by links to gingival inflammation and smoking. Although the microbiome trajectories broadly tracked periodontal destruction, a minority of individuals showed discordant microbiome-clinical phenotypes, with some individuals with periodontitis retaining otherwise eubiotic microbiomes enriched for low-abundance pathobionts, while some cases of health or mild disease had highly dysbiotic communities, suggesting distinct host susceptibility. Together, these findings define a population-scale ecological landscape of the subgingival microbiome, reveal divergent trajectories to periodontal dysbiosis, and highlight heterogeneity in the relationship between microbial community structure and clinical disease expression.

microbiology↗

Beta-lactam enhancement against methicillin-resistant Staphylococcus aureus by cell wall blockade is autolysis-dependent: a butyrolactone derivative as case in point

Methicillin-resistant Staphylococcus aureus (MRSA) is non-susceptible to beta-lactams. Blockade of cell wall biosynthesis is a potential target for beta-lactam enhancement but requires further investigation. A butyrolactone derivative enhanced beta-lactams against MRSA strains by reducing the availability of D-Ala-D-Ala. Unlike D-cycloserine, it did not inhibit D-Ala-D-Ala ligase (Ddl). Nor did it show an additive or synergistic effect when combined with cycloserine, indicating a unique mechanism for blocking cell wall precursor production that does not involve the traditional Lipid II pathway. Notably, beta-lactam potentiation by our chemical or D-cycloserine was highly dependent on the intrinsic autolytic ability of the tested MRSA strains. Strains that resisted lysis upon Triton X-100 exposure showed a minimal increase in beta-lactam susceptibility, whereas highly autolytic strains showed significant changes in their beta-lactam MICs. We have thus identified autolytic ability as the Achilles Heel in the strategy of targeting cell wall biosynthesis for beta-lactam potentiation.

microbiology↗

Rapid and largely reversible shifts in the canine fecal metabolome during dietary change

Diet can rapidly change the fecal metabolome, but less is known about recovery after the original diet is restored. We used untargeted UPLC-MS metabolomics to analyze 72 fecal samples from nine Pumi dogs during an owner-managed switch from dry food to raw food and back to dry food. Diet phase accounted for a large proportion of variation in both ionization modes. More than 13,000 LC-MS features changed at the first sampling point after the switch to raw food, with a similarly large response after return to dry food. Among features significant in both comparisons, more than 99% changed in opposite directions. At the final sampling point, no positive-mode (ESI+) features and only 13 negative-mode (ESI-) features differed from the second dry-food baseline under the same threshold. BARF-associated patterns persisted in analyses excluding individual dogs and in pedigree-adjusted candidate models, although individual feature effects depended on normalization. Putative metabolites from several biochemical classes differed in their response and recovery. The fecal metabolome therefore changed rapidly and returned largely toward baseline, with differences among dogs.

microbiology↗