Torque Teno Sus Virus 1: A Potential Surrogate Pathogen to Study Pig-Transmitted Transboundary Animal Diseases

Li, X.; Parker, B.; Boughton, R.; Beasley, J.; Smyser, T. J.; Austin, J.; Pepin, K.; Miller, R. S.; VerCauteren, K. C.; Wisely, S. M.

doi:10.1101/2024.07.03.601911

bioRxiv · 10.1101/2024.07.03.601911

Torque Teno Sus Virus 1: A Potential Surrogate Pathogen to Study Pig-Transmitted Transboundary Animal Diseases

Li, X.·Parker, B.·Boughton, R.·Beasley, J.·Smyser, T. J.·Austin, J.·Pepin, K.·Miller, R. S.·VerCauteren, K. C.·Wisely, S. M.

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Abstract

Understanding the epidemiology and transmission dynamics of transboundary animal diseases (TADs) among wild pigs (Sus scrofa) will aid in preventing the introduction or containment of TADs among wild populations. Given challenges associated with studying TADs in free-ranging populations, a surrogate pathogen system for in situ studies of pathogen dynamics would be ideal to elucidate how pathogens may circulate and be maintained within populations, how they may spillover into domestic populations, and how disease spread may be mitigated. We assessed the suitability of Torque teno sus virus 1 (TTSuV1) to serve as a surrogate pathogen for molecular epidemiological studies in wild pigs by investigating the prevalence, persistence, correlation with host health status and genetic variability at two study areas: Archbolds Buck Island Ranch in Florida and Savannah River Site in South Carolina. We then conducted a molecular epidemiological case study within the Archbolds Buck Island Ranch site to determine how analysis of this pathogen could inform transmission studies. Prevalence was high at both study areas (40%, n = 190). Phylogenetic analyses revealed high levels of genetic variability within and between study sites. Our case study showed that pairwise host relatedness and geographic distance were highly correlated to pairwise viral genetic similarity. Molecular epidemiological analyses revealed a distinct pattern of direct transmission from pig to pig occurring within and between family groups. Our results suggest TTSuV1 is highly suitable for molecular epidemiological analyses and will be useful for future in situ studies of transmission dynamics in wild pigs.

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Li, X., Parker, B., Boughton, R., Beasley, J., Smyser, T. J., Austin, J., Pepin, K., Miller, R. S., VerCauteren, K. C., Wisely, S. M.. 2024-07-05. Torque Teno Sus Virus 1: A Potential Surrogate Pathogen to Study Pig-Transmitted Transboundary Animal Diseases. https://doi.org/10.1101/2024.07.03.601911

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