Controlling semiconductor growth with structured de novo protein interfaces

Saragovi, A.; Pyles, H.; Kwon, P.; Hanikel, N.; Davila-Hernandez, F. A.; Bera, A.; Kang, A.; Brackenbrough, E.; Vafeados, D. K.; Allen, A.; Stewart, L.; Baker, D.

doi:10.1101/2024.06.24.600095

bioRxiv · 10.1101/2024.06.24.600095

Controlling semiconductor growth with structured de novo protein interfaces

Saragovi, A.·Pyles, H.·Kwon, P.·Hanikel, N.·Davila-Hernandez, F. A.·Bera, A.·Kang, A.·Brackenbrough, E.·Vafeados, D. K.·Allen, A.·Stewart, L.·Baker, D.

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Abstract

Protein design now enables the precise arrangement of atoms on the nanometer length scales of inorganic crystal nuclei, opening up the possibility of templating the growth of metal oxides including semiconductors. We designed proteins presenting regularly repeating interfaces containing functional groups that organize ions and water molecules, and characterized their ability to bind to and template metal oxides. Two interfaces promoted the growth of hematite under conditions that otherwise resulted in the formation of magnetite. Three interfaces promoted ZnO nucleation under conditions where traditional ZnO-binding peptides and control proteins were ineffective. Designed cyclic assemblies with these ZnO nucleating interfaces lining interior cavities promoted ZnO growth within the cavity. CryoEM analysis of a designed octahedral nanocage revealed atomic density likely corresponding to the growing ZnO directly adjacent to the designed nucleation promoting interfaces. These findings demonstrate that designed proteins can direct the formation of metal oxides not observed in biological systems, opening the door to protein-semiconductor hybrid materials. One Sentence SummaryWe describe the design of structured protein interfaces that bind to, promote, and localize the growth of zinc oxide and hematite, inorganic materials which are not found in biological systems.

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Saragovi, A., Pyles, H., Kwon, P., Hanikel, N., Davila-Hernandez, F. A., Bera, A., Kang, A., Brackenbrough, E., Vafeados, D. K., Allen, A., Stewart, L., Baker, D.. 2024-06-25. Controlling semiconductor growth with structured de novo protein interfaces. https://doi.org/10.1101/2024.06.24.600095

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