β-hydroxybutyrate is a metabolic regulator of proteostasis in the aged and Alzheimer disease brain

Madhavan, S. S.; Roa Diaz, S.; Peralta, S.; Nomura, M.; King, C. D.; Lin, A.; Bhaumik, D.; Shah, S.; Blade, T.; Gray, W.; Chamoli, M.; Eap, B.; Panda, O.; Diaz, D.; Garcia, T. Y.; Stubbs, B. J.; Lithgow, G. J.; Schilling, B.; Verdin, E.; Chaudhuri, A.; Newman, J. C.

doi:10.1101/2023.07.03.547547

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bioRxiv · 10.1101/2023.07.03.547547

β-hydroxybutyrate is a metabolic regulator of proteostasis in the aged and Alzheimer disease brain

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Abstract

Loss of proteostasis is a hallmark of aging and Alzheimer disease (AD). Here, we identify {beta}-hydroxybutyrate ({beta}HB), a ketone body, as a regulator of protein solubility in the aging brain. {beta}HB is a small molecule metabolite which primarily provides an oxidative substrate for ATP during hypoglycemic conditions, and also regulates other cellular processes through covalent and noncovalent protein interactions. We demonstrate {beta}HB-induced protein insolubility across in vitro, ex vivo, and in vivo mouse systems. This activity is shared by select structurally similar metabolites, is not dependent on covalent protein modification, pH, or solute load, and is observable in mouse brain in vivo after delivery of a ketone ester. Furthermore, this phenotype is selective for pathological proteins such as amyloid-{beta}, and exogenous {beta}HB ameliorates pathology in nematode models of amyloid-{beta} aggregation toxicity. We have generated a comprehensive atlas of the {beta}HB-induced protein insolublome ex vivo and in vivo using mass spectrometry proteomics, and have identified common protein domains within {beta}HB target sequences. Finally, we show enrichment of neurodegeneration-related proteins among {beta}HB targets and the clearance of these targets from mouse brain, likely via {beta}HB-induced autophagy. Overall, these data indicate a new metabolically regulated mechanism of proteostasis relevant to aging and AD.

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Madhavan, S. S., Roa Diaz, S., Peralta, S., Nomura, M., King, C. D., Lin, A., Bhaumik, D., Shah, S., Blade, T., Gray, W., Chamoli, M., Eap, B., Panda, O., Diaz, D., Garcia, T. Y., Stubbs, B. J., Lithgow, G. J., Schilling, B., Verdin, E., Chaudhuri, A., Newman, J. C.. 2023-07-03. β-hydroxybutyrate is a metabolic regulator of proteostasis in the aged and Alzheimer disease brain. https://doi.org/10.1101/2023.07.03.547547

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