CREID- A ChemoReceptor-Effector Interaction Database

Peta, V. J.; Hartman, T.; Aryal, S.; Gurung, B. S.; Singh, R.; Haas, S.; Bomgni, A.; Do, T.; Dhiman, S. J.; Gadhamshetty, V.; Gnimpieba, E.

doi:10.1101/2023.05.04.539426

bioRxiv · 10.1101/2023.05.04.539426

CREID- A ChemoReceptor-Effector Interaction Database

Peta, V. J.·Hartman, T.·Aryal, S.·Gurung, B. S.·Singh, R.·Haas, S.·Bomgni, A.·Do, T.·Dhiman, S. J.·Gadhamshetty, V.·Gnimpieba, E.

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Abstract

The ChemoReceptor-Effector Interaction Database (CREID) is a collection of bacterial chemoreceptor and effector protein and interaction data to understand the process that chemoreceptors and effectors play in various environments. Our website includes terms associated with chemosensory pathways to educate users and those involved in collaborative research to help them understand this complex biological network. It includes 2,440 proteins involved in chemoreceptor and effector systems from 7 different bacterial families with 1,996 chemoeffector interactions. It is available at https://react-creid.bicbioeng.org. Key HighlightsO_LICREID links bacterial chemoreceptors with their associated effectors. C_LIO_LIResearchers interested in what attracts or repels bacteria can use CREID as a comprehensive source for information. C_LIO_LIBiosensor developers can leverage CREID to discover better interactions for their applications. C_LIO_LICREID reveals knowledge gaps in chemoreceptor-effector interactions for both model and non-model organisms. C_LI

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Peta, V. J., Hartman, T., Aryal, S., Gurung, B. S., Singh, R., Haas, S., Bomgni, A., Do, T., Dhiman, S. J., Gadhamshetty, V., Gnimpieba, E.. 2023-05-07. CREID- A ChemoReceptor-Effector Interaction Database. https://doi.org/10.1101/2023.05.04.539426

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