Exposure to childhood maltreatment is associated with changes in sperm small non-coding RNA and DNA methylation profiles

Tuulari, J. J.; Bourgery, M.; Ahonen, A.; Ahmedani, A.; Iversen, J.; Koefoed, T. G.; Kataja, E.-L.; Karlsson, L.; Barres, R.; Karlsson, H.; Kotaja, N.

doi:10.1101/2023.04.27.538231

bioRxiv · 10.1101/2023.04.27.538231

Exposure to childhood maltreatment is associated with changes in sperm small non-coding RNA and DNA methylation profiles

Tuulari, J. J.·Bourgery, M.·Ahonen, A.·Ahmedani, A.·Iversen, J.·Koefoed, T. G.·Kataja, E.-L.·Karlsson, L.·Barres, R.·Karlsson, H.·Kotaja, N.

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Abstract

BackgroundChildhood maltreatment exposure (CME) increases the risk of adverse long-term health consequences for the exposed individual. Animal studies suggest that CME may also influence the health and behaviour in the next generation offspring through CME-driven epigenetic changes in the paternal germ line. The contribution of paternal early life stress on the health of the next generation in humans is not fully elucidated. MethodsIn this study, we measured paternal CME using the Trauma and Distress Scale (TADS) questionnaire and mapped sperm-borne sncRNAs expression by small RNA sequencing (small RNA-seq) and DNA methylation (DNAme) in spermatozoa by reduced-representation bisulfite sequencing (RRBS-seq) in males from the FinnBrain Birth Cohort Study. The study design was a (nested) case-control study, high-TADS (TADS [≥] 39, n = 25 for DNAme and n = 14 for small RNA-seq) and low-TADS (TADS [≤] 10, n = 30 for DNAme and n = 16 for small RNA-seq)). Groups were compared to identify specific epigenetic signatures associated with TADS levels in the spermatozoa of participants. ResultsCompared to the control group, high CME was associated with altered sperm sncRNA expression and DNAme profiles. Particularly, we identified several tRNA-derived small RNAs (tsRNAs) and miRNAs with markedly changed levels in males with high CME. DNA methylation analysis identified several genomic regions with differentially methylated CpGs between groups. Notably, we identified two epigenetic marks related to brain development with distinct profiles between CME and controls, the miRNA hsa-mir-34c-5p and differential methylation of the region in proximity of FSCN1. ConclusionsThis study provides further evidence that early life stress influences the paternal germ line epigenome and supports a possible contribution in the development of the central nervous system of the next generation.

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Tuulari, J. J., Bourgery, M., Ahonen, A., Ahmedani, A., Iversen, J., Koefoed, T. G., Kataja, E.-L., Karlsson, L., Barres, R., Karlsson, H., Kotaja, N.. 2023-04-28. Exposure to childhood maltreatment is associated with changes in sperm small non-coding RNA and DNA methylation profiles. https://doi.org/10.1101/2023.04.27.538231

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