Assessing genotype adaptability and stability in perennial forage breeding trials using random regression models for longitudinal dry matter yield data

Fernandes Filho, C. C.; Barrios, S. C. L.; Santos, M. F.; Nunes, J. A. R.; do Valle, C. B.; Jank, L.; Rios, E. F.

doi:10.1101/2023.03.20.533513

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bioRxiv · 10.1101/2023.03.20.533513

Assessing genotype adaptability and stability in perennial forage breeding trials using random regression models for longitudinal dry matter yield data

Fernandes Filho, C. C.·Barrios, S. C. L.·Santos, M. F.·Nunes, J. A. R.·do Valle, C. B.·Jank, L.·Rios, E. F.

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Abstract

Genotype selection for dry matter yield (DMY) in perennial forage species is based on repeated measures over time. Repeated measurements in forage breeding trials generate longitudinal datasets that must be properly analyzed giving a useful interpretation in the genotype selection process. In this study, we have presented a random regression (RRM) approach for selecting genotypes based on longitudinal DMY data generated from ten breeding trials and three perennial species, alfalfa (Medicago sativa L.), guineagrass (Megathyrsus maximus), and brachiaria (Urochloa spp.). We also proposed the estimation of adaptability based on the area under the curve and stability based on the curve coefficient of variation. Our results showed that RRM always approximated the (co)variance structure into an autoregressive pattern. Furthermore, RRM can offer useful information about longitudinal data in forage breeding trials, where the breeder can select genotypes based on their seasonality by interpreting reaction norms. Therefore, we recommend using RRM for longitudinal traits in breeding trials for perennial species.

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Fernandes Filho, C. C., Barrios, S. C. L., Santos, M. F., Nunes, J. A. R., do Valle, C. B., Jank, L., Rios, E. F.. 2023-03-23. Assessing genotype adaptability and stability in perennial forage breeding trials using random regression models for longitudinal dry matter yield data. https://doi.org/10.1101/2023.03.20.533513

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