Eddy current-induced artifacts correction in high gradient strength diffusion MRI with dynamic field monitoring: demonstration in ex vivo human brain imaging

Ramos Llorden, G.; Park, D.; Kirsch, J. E.; Scholz, A.; Keil, B.; Maffei, C.; Lee, H.-H.; Bilgic, B.; Edlow, B.; Mekkaoui, C.; Yendiki, A.; Witzel, T.; Huang, S. Y.

doi:10.1101/2023.02.15.528684

bioRxiv · 10.1101/2023.02.15.528684

Eddy current-induced artifacts correction in high gradient strength diffusion MRI with dynamic field monitoring: demonstration in ex vivo human brain imaging

Ramos Llorden, G.·Park, D.·Kirsch, J. E.·Scholz, A.·Keil, B.·Maffei, C.·Lee, H.-H.·Bilgic, B.·Edlow, B.·Mekkaoui, C.·Yendiki, A.·Witzel, T.·Huang, S. Y.

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Abstract

PurposeTo demonstrate the advantages of spatiotemporal magnetic field monitoring to correct eddy current-induced artifacts (ghosting and geometric distortions) in high gradient strength diffusion MRI (dMRI). MethodsA dynamic field camera with 16 NMR field probes was used to characterize eddy current fields induced from diffusion gradients for different gradients strengths (up to 300 mT/m), diffusion directions, and shots in a 3D multi-shot EPI sequence on a 3T Connectom scanner. The efficacy of dynamic field monitoring-based image reconstruction was demonstrated on high-resolution whole brain ex vivo dMRI. A 3D multi-shot image reconstruction framework was informed with the actual nonlinear phase evolution measured with the dynamic field camera, thereby accounting for high-order eddy currents fields on top of the image encoding gradients in the image formation model. ResultsEddy current fields from diffusion gradients at high gradient strength in a 3T Connectom scanner are highly nonlinear in space and time, inducing high-order spatial phase modulations between odd/even echoes and shots that are not static during the readout. Superior reduction of ghosting and geometric distortion was achieved with dynamic field monitoring compared to ghosting approaches such as navigator- and structured low-rank-based methods or MUSE, followed by image-based distortion correction with eddy. Improved dMRI analysis is demonstrated with diffusion tensor imaging and high-angular resolution diffusion imaging. ConclusionStrong eddy current artifacts characteristic of high gradient strength dMRI can be well corrected with dynamic field monitoring-based image reconstruction, unlike the two-step approach consisting of ghosting correction followed by geometric distortion reduction with eddy.

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Ramos Llorden, G., Park, D., Kirsch, J. E., Scholz, A., Keil, B., Maffei, C., Lee, H.-H., Bilgic, B., Edlow, B., Mekkaoui, C., Yendiki, A., Witzel, T., Huang, S. Y.. 2023-02-16. Eddy current-induced artifacts correction in high gradient strength diffusion MRI with dynamic field monitoring: demonstration in ex vivo human brain imaging. https://doi.org/10.1101/2023.02.15.528684

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