Search bioRxiv⌕ Search

bioRxiv · 10.1101/2022.09.22.509042

In-silico and in-vitro evaluation of anti-oxidant and anti-hypertensive activities of Chenopodium ambrosoides LINN. ethanol leaf extract

Abstract

Oxidative stress and free radicals have been implicated in ethno-pathogenesis of hypertension and cardiovascular disease. C. ambrosoides Linn. is a popular plant used in the management of oxidative stress related diseases such as hypertension and obesity in Nigeria and West African countries; however, studies validating the antioxidant and antihypertensive potential of this plant is scanty in literature. Thus, this study was designed to investigate the antioxidant and antihypertensive activities of C. ambrosoides ethanolic leaf extract using in-vitro (vis-a-vis) DPPH free radical scavenging assay, nitric oxide radical inhibition assay, lipid peroxidation inhibition assay, ferric reducing power assay and angiotensin converting enzyme inhibition assay) and in-silico (Molecular docking) techniques and results analyzed using GraphPad prism8 software and Multiple test as criteria for statistical comparison and significance. Gas chromatography mass spectrometry (GCMS) analysis was employed to identify constituent bioactive compounds in the extract. The results of the in-vitro anti-oxidants assays show dose dependent inhibition with the highest activity observed at 2.5 mg/ml. The ferric reducing power activity of the extract significantly (P<0.05) shows higher activity than the ascorbic acid standard at all concentration with the highest activity observed at 2.5mg/ml (77.030% against 69.159%). The extract significantly scavenged DPPH radical than ascorbic acid standard at 2.5mg/ml (81.161% against 75.378%), however at low concentration (1.5mg/ml-0.5mg/ml) the standard shows higher activity than the extract, however dose dependence was maintained. Ascorbic acid standard significantly shows higher activity than the extracts lipid peroxidation inhibition and nitric oxide inhibition activity at all concentration. The extract exhibited high angiotensin converting enzyme (ACE) inhibited in a dose dependent manner with the highest activity at 2.5mg/ml (95.990%). The ACE inhibitory potential of C. ambrosoides extract was corroborated by in-silico studies which revealed that 14 out of the 96 identified bioactive compounds through GCMS exhibited higher negative binding affinities than lisinopril (-6.8 Kcal/mol), with the compound 2,4-Diamino-6,8-bis[3,4-dichlorophenyl]-5,6-dihydro-8H-thiapyrano[4,34,5]thieno[2,3d]pyrimidine having the highest binding affinity (-8.0Kcal/mol) In conclusion, it is suggested that the anti-hypertensive activity demonstrated by C. ambrosoides might be mediated via its anti-oxidant ability and ACE inhibitory potential.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Olaniyi, A. c., Oluwatobi, O. A., Oluwabunmi, A. T.. 2022-09-23. In-silico and in-vitro evaluation of anti-oxidant and anti-hypertensive activities of Chenopodium ambrosoides LINN. ethanol leaf extract. https://doi.org/10.1101/2022.09.22.509042

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

MgATP/MgADP-dependent conformational dynamics and intrinsically disordered regions of vascular KATP channels revealed by cryoEM

Vascular smooth muscle KATP channels, composed of the pore-forming Kir6.1 and regulatory SUR2B subunits, control vascular tone, dysfunction of which causes systemic disease. Vascular KATP is regulated by Mg-nucleotides, but the underlying structural mechanism has remained elusive. Here, we determined cryoEM structures of these channels in the presence of MgATP and MgADP. Two key structures captured, one showing the SUR2B-nucleotide binding domains (NBDs) separated and one showing the SUR2B-NBDs dimerized, reveal conformation-specific organization of intrinsically disordered regions (IDRs) found in both Kir6.1 and SUR2B. In the NBD-separated conformation, the Kir6.1-N terminal IDR (KNt) sits within the central cleft of the ABC-core of SUR2B. In the NBD-dimerized conformation, KNt is excluded from the central cleft and instead forms contacts with an ED domain comprising 15 consecutive glutamate and aspartate residues within a SUR2B IDR, the N1-T2 linker connecting NBD1 (N1) to transmembrane domain 2 (T2). Moreover, within the N1-T2 linker a regulatory helix seen between the two NBDs in the NBD-separated conformation moves to outside the dimerized NBDs, interacting with the C-terminal residues unique to SUR2B, in the NBD-dimerized conformation. MD simulations further reveal that transient but frequent interactions mediated by the IDRs may facilitate Mg-nucleotide dependent conformational switch in vascular KATP channels.

biochemistry↗

Probing the sequence variability tolerance in a de novo α-helical barrel biocatalyst

De novo-designed enzymes have recently achieved high catalytic activity and stereoselectivity while demonstrating exceptional thermostability in entirely novel protein scaffolds. Among these, -helical barrel protein scaffolds are attractive structures for biocatalysis due to their structural simplicity, high thermostability, and rationalizable sequence patterning. However, enabling major structural reengineering of these scaffolds while maintaining the structure, stability and catalytic activity while also improving soluble protein production remain major challenges and pose the fundamental question how engineerable a de novo backbone-sequence pair is. Here, we combine deep learning based and classic computational protein design to modify and optimize de novo -helical barrel biocatalysts. Using the previously reported six-helical barrel 6H5L as a model scaffold, AlphaFold2-guided RosettaRemodel enabled the design of a truncated variant, whose crystal structure closely matches the design model. Additional sequence-redesign using ProteinMPNN generated a variant with a tenfold increase of soluble protein yield in Escherichia coli. Biochemical, biophysical, and structural analyses showed that both variants retained the overall barrel architecture, high thermal stability, and catalytic activity for both purified protein and whole-cell systems. Detailed kinetic analysis on the variants showed both variation in kcat and Km, reflecting changes in catalytic turnover and substrate binding. Together, these approaches provide new insights and possibilities for the further engineering of functional de novo -helical barrels, their ability to withstand dramatically large sequence changes and their broader application in biocatalysis and biotechnology.

biochemistry↗

Cytokine-induced nuclear translocation of STAT1 via a non-transferable NLS

The targeting function of nuclear localization signals (NLSs) is generally considered independent of a protein's native sequence or fold and is readily transferable to heterologous cargos. Contrary to this paradigm, rapid nuclear translocation of phosphorylated STAT1 (pSTAT1) following cytokine stimulation requires importin {beta}, Ran-GTP, and the importin 5 isoform, which recognizes a non-transferable NLS. Here, we present cryo-EM structures of pSTAT1 bound to importin 5, revealing an asymmetric 2:1 complex that diverges from canonical NLS-mediated cargo recognition. Importin 5 occupies the DNA-binding groove of the pSTAT1 dimer, with a single STAT1 N-terminal domain positioning the C-terminal Armadillo repeats 9-10 (S1B domain) orthogonal to the DNA-binding interface. This interface is also targeted by the Ebola virus protein VP24, an antagonist of interferon signaling. We further show that Ran-GTP alone is insufficient to trigger nuclear release of pSTAT1, which additionally requires the exportin CAS. A cryo-EM reconstruction of the CAS-Ran-GTP-5 complex, supported by in vitro competition assays, demonstrates that CAS and pSTAT1 are mutually exclusive ligands for importin 5. Together, these findings define the molecular choreography of cytokine-induced STAT1 nuclear translocation and release, establishing a general paradigm for STAT family signaling.

biochemistry↗