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bioRxiv · 10.1101/2022.02.20.481218

From bacteria to plants: a repurposing strategy in the pursuit for novel herbicides

Mackie, E.·Barrow, A.·Giel, M.-C.·Hulett, M. D.·Gendall, A.·Panjikar, S.·Soares da Costa, T.
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Abstract

Herbicide resistance represents one of the biggest threats to our natural environment and agricultural sector. Thus, new herbicides are urgently needed to tackle the rise in herbicideresistant weeds. Here, we employed a novel strategy to repurpose a failed antibiotic into a new and target-specific herbicidal compound. Specifically, we identified an inhibitor of bacterial dihydrodipicolinate reductase (DHDPR), an enzyme involved in lysine biosynthesis in plants and bacteria, that exhibited no antibacterial activity but severely attenuated germination of the plant Arabidopsis thaliana. We confirmed that the inhibitor targets plant DHDPR orthologues in vitro, and exhibits no toxic effects against human cell lines. A series of analogues were then synthesised with improved efficacy in germination assays and against soil-grown A. thaliana plants. We also showed that our lead compound is the first lysine biosynthesis inhibitor with herbicidal activity against a weed species, providing proof-of-concept that DHDPR inhibition may represent a much-needed new herbicide mode of action. Furthermore, this study exemplifies the untapped potential of repurposing failed antibiotic scaffolds to fast-track the development of herbicide candidates targeting the respective plant enzymes to combat the global rise in herbicide-resistant weeds.

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Mackie, E., Barrow, A., Giel, M.-C., Hulett, M. D., Gendall, A., Panjikar, S., Soares da Costa, T.. 2022-02-21. From bacteria to plants: a repurposing strategy in the pursuit for novel herbicides. https://doi.org/10.1101/2022.02.20.481218

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