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bioRxiv · 10.1101/2021.10.29.466427

Mean field approximation of network of biophysical neurons driven by conductance-based ion exchange dynamics

Bandyopadhyay, A.·Petkoski, S.·Jirsa, V.
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Abstract

Whole-brain simulations are a valuable tool for gaining insight into the multiscale processes that regulate brain activity. Due to the complexity of the brain, it is impractical to include all microscopic details in a simulation. Hence, researchers often simulate the brain as a network of coupled neural masses, each described by a mean-field model. These models capture the essential features of neuronal populations while approximating most biophysical details. However, it may be important to include certain parameters that significantly impact brain function. The concentration of ions in the extracellular space is one key factor to consider, as its fluctuations can be associated with healthy and pathological brain states. In this paper, we develop a new mean-field model of a population of Hodgkin-Huxley-type neurons, retaining a microscopic perspective on the ion-exchange mechanisms driving neuronal activity. This allows us to maintain biophysical interpretability while bridging the gap between micro- and macro-scale mechanisms. Our model is able to reproduce a wide range of activity patterns, also observed in large neural network simulations. Specifically, slow-changing ion concentrations modulate the fast neuroelectric activity, a feature of our model that we validated through in vitro experiments. By studying how changes in extracellular ionic conditions can affect whole-brain dynamics, this model serves as a foundation to measure biomarkers of pathological activity and provide potential therapeutic targets in cases of brain dysfunctions like epilepsy.

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Bandyopadhyay, A., Petkoski, S., Jirsa, V.. 2021-11-01. Mean field approximation of network of biophysical neurons driven by conductance-based ion exchange dynamics. https://doi.org/10.1101/2021.10.29.466427

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