selscan 2.0: scanning for sweeps in unphased data

Szpiech, Z. A.

doi:10.1101/2021.10.22.465497

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bioRxiv · 10.1101/2021.10.22.465497

selscan 2.0: scanning for sweeps in unphased data

Szpiech, Z. A.

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Abstract

SummarySeveral popular haplotype-based statistics for identifying recent or ongoing positive selection in genomes require knowledge of haplotype phase. Here we provide an update to selscan which implements a re-definition of these statistics for use in unphased data. Availability and ImplementationSource code and binaries freely available at https://github.com/szpiech/selscan, implemented in C/C++ and supported on Linux, Windows, and MacOS. Contactszpiech@psu.edu Supplemental InformationOnline supplemental information available

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Szpiech, Z. A.. 2021-10-24. selscan 2.0: scanning for sweeps in unphased data. https://doi.org/10.1101/2021.10.22.465497

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