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bioRxiv · 10.1101/2021.10.05.463172

METAMDB: METABOLIC ATOM MAPPING DATABASE

Starke, C.·Wegner, A.
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Abstract

AO_SCPLOWBSTRACTC_SCPLOWMetAMDB (https://metamdb.tu-bs.de/) is an open source metabolic atom mapping database, providing atom mappings for around 75000 metabolic reactions. Each atom mapping can be inspected and downloaded either as a RXN file or as a graphic in SVG format. In addition, MetAMDB offers the possibility of automatically creating atom mapping models based on user-specified metabolic networks. These models can be of any size (small to genome scale) and can subsequently be used in standard 13C metabolic flux analysis software.

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Starke, C., Wegner, A.. 2021-10-06. METAMDB: METABOLIC ATOM MAPPING DATABASE. https://doi.org/10.1101/2021.10.05.463172

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