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bioRxiv · 10.1101/2021.09.10.459783

MinoTour, real-time monitoring and analysis for Nanopore Sequencers.

Munro, R. J.·Santos, R.·Payne, A.·Forey, T.·Osei, S.·Holmes, N.·Loose, M.
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Abstract

SummaryMinoTour offers a LIMS system for Oxford Nanopore Technology (ONT) sequencers, with real-time metrics and analysis available permanently for review. Integration of unique real-time automated analysis can reduce the time required to answer biological questions, including mapping and classification of sequence whilst a run is in progress. Real-time sequence data requires new methods of analysis which do not wait for the completion of a run and MinoTour provides a framework to allow users to exploit these features. Availability and ImplementationSource code and documentation are available at https://github.com/LooseLab/minotourcli and https://github.com/LooseLab/minotourapp. Docker images are available from https://hub.docker.com/r/adoni5/, and can be installed using a preconfigured docker-compose script at https://github.com/LooseLab/minotour-docker. An example server is available at http://137.44.59.170.

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Munro, R. J., Santos, R., Payne, A., Forey, T., Osei, S., Holmes, N., Loose, M.. 2021-09-12. MinoTour, real-time monitoring and analysis for Nanopore Sequencers.. https://doi.org/10.1101/2021.09.10.459783

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