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bioRxiv · 10.1101/2021.05.14.444083

Visual Comparison of Phylogenetic Trees Through iPhyloC, a New Interactive Web-based Framework

Hammoud, M.·Santos, C. M.·Gois, J. P.
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Abstract

Current side-by-side phylogenetic trees comparison frameworks face two issues: (1) accepting binary trees as input, and (2) assuming input trees having identical or highly overlapping taxa. We present a task abstraction of the problem of side-by-side comparison of two phylogenetic trees and propose a set-based measure for detailed structural comparison between two phylogenetic trees, which can be non-binary and not highly overlapping. iPhyloC is an interactive web-based framework including automatic identification of the common taxa in both trees, comparing input trees in several modes, intuitive design, high usability, scalability to large trees, and cross-platform support. iPhyloC was tested in hypothetical and real biological examples.

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Hammoud, M., Santos, C. M., Gois, J. P.. 2021-05-17. Visual Comparison of Phylogenetic Trees Through iPhyloC, a New Interactive Web-based Framework. https://doi.org/10.1101/2021.05.14.444083

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