Auxin-triggered changes in the Arabidopsis root tip (phospho)proteome reveal novel root growth regulators

De Smet, I.; Nikonorova, N.; Murphy, E.; Fonseca de Lima, C. F.; Zhu, S.; van de Cotte, B.; Vu, L. D.; Balcerowicz, D.; Li, L.; Kong, X.; De Rop, G.; Beeckman, T.; Friml, J.; Vissenberg, K.; Morris, P. C.; Ding, Z.

doi:10.1101/2021.03.04.433936

bioRxiv · 10.1101/2021.03.04.433936

Auxin-triggered changes in the Arabidopsis root tip (phospho)proteome reveal novel root growth regulators

De Smet, I.·Nikonorova, N.·Murphy, E.·Fonseca de Lima, C. F.·Zhu, S.·van de Cotte, B.·Vu, L. D.·Balcerowicz, D.·Li, L.·Kong, X.·De Rop, G.·Beeckman, T.·Friml, J.·Vissenberg, K.·Morris, P. C.·Ding, Z.

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Abstract

Auxin plays a dual role in growth regulation and, depending on the tissue and concentration of the hormone, it can either promote or inhibit division and expansion processes in plants. Recent studies revealed that, beyond transcriptional reprogramming, alternative auxin-controlled mechanisms regulate root growth. Here, we explored the impact of different auxin concentrations on the root tip proteome and phosphoproteome, generating a unique resource. From the phosphoproteome data we pinpointed (novel) growth regulators, such as the RALF34-THE1 module. Our results together with previously published studies suggest that auxin, H+-ATPases, cell wall modifications and cell wall sensing receptor-like kinases are tightly embedded in a pathway regulating cell elongation. Furthermore, our study assigned a novel role to MKK2 as a regulator of primary root growth and a (potential) regulator of auxin biosynthesis and signalling, and suggests the importance of the MKK2 Thr31 phosphorylation site for growth regulation in the Arabidopsis root tip. ONE SENTENCE SUMMARYAn auxin-triggered Arabidopsis root tip (phospho)proteome reveals novel root growth regulators

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De Smet, I., Nikonorova, N., Murphy, E., Fonseca de Lima, C. F., Zhu, S., van de Cotte, B., Vu, L. D., Balcerowicz, D., Li, L., Kong, X., De Rop, G., Beeckman, T., Friml, J., Vissenberg, K., Morris, P. C., Ding, Z.. 2021-03-06. Auxin-triggered changes in the Arabidopsis root tip (phospho)proteome reveal novel root growth regulators. https://doi.org/10.1101/2021.03.04.433936

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