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bioRxiv · 10.1101/2021.02.28.433213

The global carrier frequency and genetic prevalence of Upshaw-Schulman syndrome

Zhao, T.·Fan, S.·Sun, L.
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Abstract

PurposeUpshaw-Schulman syndrome (USS) is an autosomal recessive disease of thrombotic microangiopathy, caused by pathogenic variants in ADAMTS13. We aimed to (1) perform data mining pathogenicity of ADAMTS13 variants, (2) estimate carrier frequency and genetic prevalence of USS from gnomAD data, and (3) curated ADAMTS13 gene pathogenic variants dataset. MethodsPubMed and Scopus were comprehensive retrieved. All previously reported pathogenic ADAMTS13 variants were compiled and annotated with gnomAD allele frequencies. Pooled global and population-specific carrier frequency and genetic prevalence for USS were calculated using Hardy-Weinberg equation. Resultswe mined reported disease-causing variants, of these were present in gnomAD exomes v2.1.1, filtering by allele frequency, pathogenicity of variants were classified by American College of Medical Genetics and Genomics criteria. The genetic prevalence and carrier frequency of USS was 0.43 per 1 million (95% CI: [0.36, 0.55]) and 1.31 per thousand, respectively. Combining known with novel pathogenic/likely pathogenic variants, the genetic prevalence and carrier frequency are 1.1 per 1 million (95% CI: [0.89, 1.37]) and 2.1 per thousand, respectively. Conclusionthe genetic prevalence and carrier frequency of Upshaw-Schulman syndrome are within range of previously rough estimated.

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Zhao, T., Fan, S., Sun, L.. 2021-03-01. The global carrier frequency and genetic prevalence of Upshaw-Schulman syndrome. https://doi.org/10.1101/2021.02.28.433213

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