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bioRxiv · 10.1101/2021.01.19.427209

UniverSC: a flexible cross-platform single-cell data processing pipeline

Kelly, S. T.·Battenberg, K.·Hetherington, N. A.·Hayashi, M.·Minoda, A.
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Abstract

Single-cell RNA-sequencing analysis to quantify RNA molecules in individual cells has become popular owing to the large amount of information one can obtain from each experiment. We have developed UniverSC (https://github.com/minoda-lab/universc), a universal single-cell processing tool that supports any UMI-based platform. Our command-line tool enables consistent and comprehensive integration, comparison, and evaluation across data generated from a wide range of platforms.

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Kelly, S. T., Battenberg, K., Hetherington, N. A., Hayashi, M., Minoda, A.. 2021-01-19. UniverSC: a flexible cross-platform single-cell data processing pipeline. https://doi.org/10.1101/2021.01.19.427209

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