BRCA1-BARD1 regulates transcription through modulating topoisomerase IIβ

Jeong, J.; Kang, K.; Jo, D. S.; Cong, A. T.; Kim, D.; Cho, D.-H.; Schellenberg, M. J.; Calderwood, S. K.; Chen, B. P. C.; Bunch, H.

doi:10.1101/2020.12.12.422337

bioRxiv · 10.1101/2020.12.12.422337

BRCA1-BARD1 regulates transcription through modulating topoisomerase IIβ

Jeong, J.·Kang, K.·Jo, D. S.·Cong, A. T.·Kim, D.·Cho, D.-H.·Schellenberg, M. J.·Calderwood, S. K.·Chen, B. P. C.·Bunch, H.

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Abstract

RNA polymerase II (Pol II)-dependent transcription in stimulus-inducible genes requires topoisomerase II{beta} (TOP2B)-mediated DNA strand break and the activation of DNA damage response signaling in humans. Here, we report a novel function of the breast cancer 1 (BRCA1)-BRCA1 associated ring domain 1 (BARD1) complex, in this process. We found that BRCA1 is phosphorylated at S1524 by the kinases ATM and ATR during gene activation and that this event is essential for productive transcription. Our in vitro biochemical analyses showed TOP2B and BARD1 interaction and colocalization in the EGR1 transcription start site (TSS) and that the BRCA1-BARD1 complex ubiquitinates TOP2B, which appears to stabilize TOP2B protein in the cell and binding to DNA. Intriguingly, BRCA1 phosphorylation at S1524 controls this interaction. In addition, genomic analyses indicated colocalization between TOP2B and BRCA1 in a large number of protein-coding genes. Together, these findings reveal the novel function of the BRCA1-BARD1 complex in gene expression and in the regulation of TOP2B during Pol II transcription. Significance StatementMaintaining genomic integrity against cellular and extracellular genotoxic elements is essential for normal cell growth and function. Recent studies indicated that stimulus-induced transcription provokes topoisomerase II{beta}-mediated DNA strand break and DNA damage response signaling, requiring DNA repair to be coupled with transcription. Here, we present a novel role for the BRCA1-BARD1 complex in regulating the transcription of serum-inducible genes and the stability of topoisomerase II{beta}. The mechanism involving topoisomerase II{beta} ubiquitination by the BRCA1-BARD1 complex and the phosphorylation of BRCA1 S1524 upon transcriptional activation appears to function as a switch to the reaction. Our findings provide the first evidence of functional interaction between the BRCA1-BARD1 complex and topoisomerase II{beta} in transcription in humans.

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Jeong, J., Kang, K., Jo, D. S., Cong, A. T., Kim, D., Cho, D.-H., Schellenberg, M. J., Calderwood, S. K., Chen, B. P. C., Bunch, H.. 2020-12-12. BRCA1-BARD1 regulates transcription through modulating topoisomerase IIβ. https://doi.org/10.1101/2020.12.12.422337

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