OmicLoupe: Facilitating biological discovery by interactive exploration of multiple omic datasets and statistical comparisons

Willforss, J.; Siino, V.; Levander, F.

doi:10.1101/2020.10.22.349944

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bioRxiv · 10.1101/2020.10.22.349944

OmicLoupe: Facilitating biological discovery by interactive exploration of multiple omic datasets and statistical comparisons

Willforss, J.·Siino, V.·Levander, F.

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Abstract

Visual exploration of gene product behavior across multiple omic datasets can pinpoint technical limitations in data and reveal biological trends. The OmicLoupe software was developed to facilitate such exploration and provides more than 15 interactive cross-dataset visualizations for omic data. It expands visualizations to multiple datasets for quality control, statistical comparisons and overlap and correlation analyses, while allowing for rapid inspection and downloading of selected features. The usage of OmicLoupe is demonstrated in three diverse studies, including an analysis of SARS-CoV-2 infection across omic layers, based on previously published proteomics and transcriptomics studies. OmicLoupe is available at quantitativeproteomics.org/omicloupe

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Willforss, J., Siino, V., Levander, F.. 2020-10-22. OmicLoupe: Facilitating biological discovery by interactive exploration of multiple omic datasets and statistical comparisons. https://doi.org/10.1101/2020.10.22.349944

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