Cytomegaloviral determinants of CD8+ T cell programming and RhCMV/SIV vaccine efficacy

Malouli, D.; Hansen, S. G.; Hancock, M. H.; Hughes, C. M.; Ford, J. C.; Gilbride, R. M.; Ventura, A. B.; Morrow, D.; Taher, H.; Uebelhoer, L. S.; McArdle, M. R.; Papen, C. R.; Espinosa Trethewy, R.; Oswald, K.; Shoemaker, R.; Berkemeier, B.; Bosche, W.; Hull, M.; Green, J.; Axthelm, M. K.; Shao, J.; Edlefsen, P.; Grey, F.; Nelson, J. A.; Lifson, J. D.; Streblow, D. N.; Sacha, J.; Früh, K.; Picker, L. J.

doi:10.1101/2020.09.30.321349

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bioRxiv · 10.1101/2020.09.30.321349

Cytomegaloviral determinants of CD8+ T cell programming and RhCMV/SIV vaccine efficacy

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Abstract

Simian immunodeficiency virus (SIV) insert-expressing, 68-1 Rhesus Cytomegalovirus (RhCMV/SIV) vectors elicit major histocompatibility complex (MHC)-E- and -II-restricted, SIV-specific CD8+ T cell responses, but the basis of these unconventional responses and their contribution to demonstrated vaccine efficacy against SIV challenge in the rhesus monkeys (RMs) has not been characterized. We demonstrate that these unconventional responses resulted from a chance genetic rearrangement in 68-1 RhCMV that abrogated the function of eight distinct immunomodulatory gene products encoded in two RhCMV genomic regions (Rh157.5/.4 and Rh158-161). Differential repair of these genes with either RhCMV-derived or orthologous human CMV (HCMV)-derived sequences (UL128/130; UL146/147) leads to either of two distinct CD8+ T cell response types - MHC-Ia-restricted-only, or a mix of MHC-II- and MHC-Ia-restricted CD8+ T cells. Despite response magnitude and functional differentiation being similar to RhCMV 68-1, neither alternative response type mediated protection against SIV challenge. These findings implicate MHC-E-restricted CD8+ T cell responses as mediators of anti-SIV efficacy and indicate that translation of RhCMV/SIV vector efficacy to humans will likely require deletion of all the genes that inhibit these responses from the HCMV/HIV vector. One-sentence summaryEight genes in two spatially distinct RhCMV gene regions control induction of unconventionally restricted CD8+ T cell responses and the efficacy of RhCMV/SIV vaccine vectors against SIV challenge.

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Malouli, D., Hansen, S. G., Hancock, M. H., Hughes, C. M., Ford, J. C., Gilbride, R. M., Ventura, A. B., Morrow, D., Taher, H., Uebelhoer, L. S., McArdle, M. R., Papen, C. R., Espinosa Trethewy, R., Oswald, K., Shoemaker, R., Berkemeier, B., Bosche, W., Hull, M., Green, J., Axthelm, M. K., Shao, J., Edlefsen, P., Grey, F., Nelson, J. A., Lifson, J. D., Streblow, D. N., Sacha, J., Früh, K., Picker, L. J.. 2020-10-01. Cytomegaloviral determinants of CD8+ T cell programming and RhCMV/SIV vaccine efficacy. https://doi.org/10.1101/2020.09.30.321349

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